RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 VIPR2P41587 438 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PTPN9P43378 593 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CDC34P49427 236 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 GPR15P49685 360 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MTTPP55157 894 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 LILRA4P59901 499 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RESTQ13127 1097 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SRSF5Q13243 272 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TAZQ16635 292 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ARHGAP44Q17R89 818 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C3orf36Q3SXR2 165 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF311Q5JNZ3 666 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TCERG1LQ5VWI1 586 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C9orf57Q5W0N0 161 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 KCTD16Q68DU8 428 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C1orf94Q6P1W5 598 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 FAM171BQ6P995 826 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 FAM83HQ6ZRV2 1179 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C1orf229Q6ZS94 237 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TRMT10CQ7L0Y3 403 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 VASH1Q7L8A9 365 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PAGE2Q7Z2X7 111 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 DCP1BQ8IZD4 617 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TOP6BLQ8N6T0 577 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 LRRC52Q8N7C0 313 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C12orf50Q8NA57 414 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 BHLHE23Q8NDY6 225 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SETD9Q8NE22 299 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 OR6B3Q8NGW1 331 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 BAHD1Q8TBE0 780 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RSC1A1Q92681 617 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CD101Q93033 1021 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C18orf25Q96B23 403 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZDHHC12Q96GR4 267 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF514Q96K75 400 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ACBD6Q9BR61 282 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 C1orf43Q9BWL3 253 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SLC46A2Q9BY10 475 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 BLZF1Q9H2G9 400 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ARRDC1-AS1Q9H2J1 176 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RMND5AQ9H871 391 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SAYSD1Q9NPB0 183 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZDHHC18Q9NUE0 388 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 LPAR3Q9UBY5 353 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ADAM21Q9UKJ8 722 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MMP17Q9ULZ9 603 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF148Q9UQR1 794 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SLC9A8Q9Y2E8 581 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 STARD13Q9Y3M8 1113 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 HRH3Q9Y5N1 445 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 NOX1Q9Y5S8 564 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 UNC79Q9P2D8 2635 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TRIOO75962 3097 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 A0A075B6Q4 140 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 FAM92AA1XBS5 289 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 WDR91A4D1P6 747 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SRRM3A6NNA2 597 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 C12orf71A8MTZ7 269 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 KCNJ18B7U540 433 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 LINC01387J3KSC0 135 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 HRKO00198 91 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 KMOO15229 486 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SPRY1O43609 319 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SCGB2A1O75556 95 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RHBDL1O75783 438 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM63AO94886 807 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ONECUT2O95948 504 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 KLKB1P03952 638 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ACPPP15309 386 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PFKFB1P16118 471 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PTNP21246 168 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 AGXTP21549 392 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 HLA-FP30511 346 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 MAT2AP31153 395 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CXCR5P32302 372 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 GBP1P32455 592 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SERPINB6P35237 376 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SLC26A3P40879 764 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ARHGAP25P42331 645 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PIK3CGP48736 1102 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PXNP49023 591 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 BCAP31P51572 246 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SMSP52788 366 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PER3P56645 1201 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ACTR3P61158 418 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RPL10AP62906 217 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ATP2C1P98194 919 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 GUCY1A3Q02108 690 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CYP24A1Q07973 514 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RASGEF1BQ0VAM2 473 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CDC20Q12834 499 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ALCAMQ13740 583 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 KCNJ12Q14500 433 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 NR1D2Q14995 579 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 LARS2Q15031 903 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SGSM1Q2NKQ1 1148 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF829Q3KNS6 432 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF569Q5MCW4 686 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TTC38Q5R3I4 469 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 C6orf163Q5TEZ5 329 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms