RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CPNE3O75131 537 aaKnown RBP12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TIAF1O95411 115 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TTC4O95801 387 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 S1PR4O95977 384 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TPBGLP0DKB5 382 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 PKMP14618 531 aaKnown RBP12.63□□□□□ -0.39
SHMT2-211ENST00000554310 IVDP26440 423 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 CCNFP41002 786 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 SLC1A2P43004 574 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 ABRQ12979 859 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 GBX1Q14549 363 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 CRYMQ14894 314 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TRADDQ15628 312 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 GPR19Q15760 415 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 KYNUQ16719 465 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 SLC5A12Q1EHB4 618 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TTC23LQ6PF05 361 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 IQCKQ8N0W5 287 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 ZBTB2Q8N680 514 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 C19orf47Q8N9M1 422 aaKnown RBP12.63□□□□□ -0.39
SHMT2-211ENST00000554310 CFAP61Q8NHU2 1237 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 GABPB2Q8TAK5 448 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-211ENST00000554310 SKA2Q8WVK7 121 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-211ENST00000554310 KCNJ9Q92806 393 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 FOPNLQ96NB1 174 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TRAPPC9Q96Q05 1148 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 NRTNQ99748 197 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 TRIM51Q9BSJ1 452 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 SLC12A9Q9BXP2 914 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 CHRNA10Q9GZZ6 450 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 CCDC68Q9H2F9 335 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 PLAGL1Q9UM63 463 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 FAM169AQ9Y6X4 670 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 ZNF462Q96JM2 2506 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 A0A0J9YY10 115 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 NDC80O14777 642 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SCRG1O75711 98 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 CCNYL3P0C7X3 344 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 PVRP15151 417 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 CHRM3P20309 590 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 CD9P21926 228 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 MC1RQ01726 317 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 DHX9Q08211 1270 aaKnown RBP12.62□□□□□ -0.39
SHMT2-211ENST00000554310 GRB7Q14451 532 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 TTLL9Q3SXZ7 439 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 CRTC2Q53ET0 693 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SPANXN3Q5MJ09 141 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 KCNMB4Q86W47 210 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 TMEM126BQ8IUX1 230 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 UNC5BQ8IZJ1 945 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 PDIK1LQ8N165 341 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 RAB42Q8N4Z0 105 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 OR2L8Q8NGY9 312 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 FLVCR1-AS1Q8TAF5 88 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 MAGEC3Q8TD91 643 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 STARD8Q92502 1023 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SLC22A18Q96BI1 424 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SNF8Q96H20 258 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 EBNA1BP2Q99848 306 aaKnown RBP12.62□□□□□ -0.39
SHMT2-211ENST00000554310 MENTQ9BUN1 341 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SLC39A10Q9ULF5 831 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 SPTBP11277 2137 aa12.62□□□□□ -0.39
SHMT2-211ENST00000554310 C21orf140B9A014 251 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 TMEM150CB9EJG8 249 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 TERTO14746 1132 aaKnown RBP12.61□□□□□ -0.39
SHMT2-211ENST00000554310 RASGRF2O14827 1237 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 FKBP9O95302 570 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 MATN4O95460 622 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 C1orf105O95561 183 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 PEBP1P30086 187 aaKnown RBP12.61□□□□□ -0.39
SHMT2-211ENST00000554310 DLSTP36957 453 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 BDKRB1P46663 353 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 CLCN7P51798 805 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 CTBP1Q13363 440 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 HIF1AQ16665 826 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 HSP90AA5PQ58FG0 334 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 ZNF789Q5FWF6 425 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 HIBCHQ6NVY1 386 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-211ENST00000554310 CNSTQ6PJW8 725 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 LRIG3Q6UXM1 1119 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 TRIM73Q86UV7 250 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 FAM136AQ96C01 138 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 LRRC39Q96DD0 335 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 CATSPER2Q96P56 530 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 ZIM3Q96PE6 472 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms