RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 OR2T11Q8NH01 316 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 DNAJB14Q8TBM8 379 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 DYNC2LI1Q8TCX1 351 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 RORBQ92753 470 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 TMBIM1Q969X1 311 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 SDCCAG3Q96C92 435 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ASB2Q96Q27 587 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ACOX2Q99424 681 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 FEM1AQ9BSK4 669 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 MRPL9Q9BYD2 267 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ASPSCR1Q9BZE9 553 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CCDC90BQ9GZT6 254 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 TRPM5Q9NZQ8 1165 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 TBC1D14Q9P2M4 693 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PCTPQ9UKL6 214 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 FCF1Q9Y324 198 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PCDHGB1Q9Y5G3 927 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 COL4A6Q14031 1691 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ASPDHA6ND91 283 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PTGES3LE9PB15 166 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 HAT1O14929 419 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 GREM1O60565 184 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PQBP1O60828 265 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 TULP3O75386 442 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 KATNA1O75449 491 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ABLIM3O94929 683 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 DLGAP3O95886 979 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CTPS1P17812 591 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CXCR2P25025 360 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 HTR1EP28566 365 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 EIF2DP41214 584 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CASP3P42574 277 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ANKS6Q68DC2 871 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 BLOC1S3Q6QNY0 202 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 TMCO2Q7Z6W1 182 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 DEFB128Q7Z7B8 93 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ZDHHC13Q8IUH4 622 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 SVOPQ8N4V2 548 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ADAMTS19Q8TE59 1207 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 OVCA2Q8WZ82 227 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 IGSF21Q96ID5 467 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 RPL10LQ96L21 214 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 DSN1Q9H410 356 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CCDC177Q9NQR7 707 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 SDR39U1Q9NRG7 319 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ABCB10Q9NRK6 738 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 AFF4Q9UHB7 1163 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 YIPF1Q9Y548 306 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 OR51B4Q9Y5P0 310 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 GPR45Q9Y5Y3 372 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 BACE2Q9Y5Z0 518 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PMF1-BGLAPU3KQ54 211 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
SHMT2-207ENST00000553837 A0A1W2PP18 115 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 UPK1AO00322 258 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 RAD51BO15315 384 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 MAN1A2O60476 641 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 TBL1XO60907 577 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 ALPIP09923 528 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 PRR35P0CG20 571 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 LBPP18428 481 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 KRR1Q13601 381 aaKnown RBP11.97□□□□□ -0.49
SHMT2-207ENST00000553837 RABL3Q5HYI8 236 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 TMEM236Q5W0B7 351 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 PRR23CQ6ZRP0 262 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 PRSS48Q7RTY5 328 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 CARNMT1Q8N4J0 409 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 POC5Q8NA72 575 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 OR6K2Q8NGY2 324 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 ZNF461Q8TAF7 563 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 FAR1Q8WVX9 515 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 LINGO1Q96FE5 620 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 CAPNS2Q96L46 248 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 AIFM2Q9BRQ8 373 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 C1QTNF3Q9BXJ4 246 aa11.97□□□□□ -0.49
SHMT2-207ENST00000553837 EIF2B4Q9UI10 523 aaKnown RBP11.97□□□□□ -0.49
SHMT2-207ENST00000553837 A6NL46 340 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 G3V2T6 193 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 TAF4O00268 1085 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.49
SHMT2-207ENST00000553837 HOXC11O43248 304 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-207ENST00000553837 HOXA2O43364 376 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 FZD6O60353 706 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 KCNK2O95069 426 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 PTTG1O95997 202 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 CTRB1P17538 263 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 CLCN7P51798 805 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 VBP1P61758 197 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 EMX1Q04741 257 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-207ENST00000553837 CD47Q08722 323 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 C19orf57Q0VDD7 668 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 FUT11Q495W5 492 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 CCDC58Q4VC31 144 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 PYCR3Q53H96 274 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 RSBN1Q5VWQ0 802 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-207ENST00000553837 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms