RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ARF3P61204 181 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 TMF1P82094 1093 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 ARF1P84077 181 aaKnown RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 CDK3Q00526 305 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 MS4A2Q01362 244 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 E2F5Q15329 346 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 TAF1BQ53T94 588 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 TCTEX1D4Q5JR98 221 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 C20orf194Q5TEA3 1177 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 FAAH2Q6GMR7 532 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 COMMD2Q86X83 199 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 HOGA1Q86XE5 327 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 CFAP206Q8IYR0 622 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 KIRREL3Q8IZU9 778 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 OR13J1Q8NGT2 312 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 ARHGAP45Q92619 1136 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 HDAC2Q92769 488 aaKnown RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 NEK1Q96PY6 1258 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 FNBP1Q96RU3 617 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 LRRC61Q9BV99 259 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 FNDC11Q9BVV2 318 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 SPATC1LQ9H0A9 340 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 DPAGT1Q9H3H5 408 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 KCNK15Q9H427 330 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 ATP13A3Q9H7F0 1226 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 SEPT11Q9NVA2 429 aaKnown RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 HACL1Q9UJ83 578 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 MTUS1Q9ULD2 1270 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 PPP1R3CQ9UQK1 317 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF148Q9UQR1 794 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 NME7Q9Y5B8 376 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 ARHGEF12Q9NZN5 1544 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 PCNX3Q9H6A9 2034 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 HECW1Q76N89 1606 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 ATP10AO60312 1499 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 ANKRD61A6NGH8 418 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF195O14628 629 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 PI15O43692 258 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 MED24O75448 989 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 IGHV4-31P0DP07 118 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 AZU1P20160 251 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 MMP12P39900 470 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 SUOXP51687 545 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 PAX9P55771 341 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 GSCP56915 257 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 PDLIM3Q53GG5 364 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 TICAM2Q86XR7 235 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 CDC20BQ86Y33 519 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 AFAP1Q8N556 730 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 TTC39CQ8N584 583 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 OR10G8Q8NGN5 311 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 OR2AJ1Q8NGZ0 328 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 PHLDA1Q8WV24 401 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 IRGQQ8WZA9 623 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 SAT2Q96F10 170 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 NUP85Q9BW27 656 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 PPIL3Q9H2H8 161 aaKnown RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF701Q9NV72 531 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 CACNG4Q9UBN1 327 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 SEC63Q9UGP8 760 aaKnown RBP3.37□□□□□ -1.87
SCFD1-210ENST00000553693 EFCAB5A4FU69 1503 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 ZMYM4Q5VZL5 1548 aa3.37□□□□□ -1.87
SCFD1-210ENST00000553693 NCOA1Q15788 1441 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 SCAPERQ9BY12 1400 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 MAGI2Q86UL8 1455 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 TSPAN1O60635 241 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 USO1O60763 962 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 SRSF10O75494 262 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 CREG1O75629 220 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 CENPBP07199 599 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 GATA2P23769 480 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 PSMB10P40306 273 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 GARSP41250 739 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 CASP2P42575 452 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 B3GALT5-AS1P59052 145 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 ELAVL2Q12926 359 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 NECTIN1Q15223 517 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 MAPRE1Q15691 268 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 ELFN2Q5R3F8 820 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 DHRS7BQ6IAN0 325 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF774Q6NX45 483 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 LMNTD2Q8IXW0 634 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 OR2L2Q8NH16 312 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 OR52N5Q8NH56 324 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 SLCO2A1Q92959 643 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 OMA1Q96E52 524 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 MAK16Q9BXY0 300 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 MIS12Q9H081 205 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 S1PR5Q9H228 398 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 CPVLQ9H3G5 476 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 PPANQ9NQ55 473 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 OSER1Q9NX31 292 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 OR6C2Q9NZP2 312 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF69Q9UC07 566 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 ZHX1Q9UKY1 873 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 TP53TG3Q9ULZ0 132 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 LAS1LQ9Y4W2 734 aaKnown RBP3.36□□□□□ -1.87
SCFD1-210ENST00000553693 CTTNBP2Q8WZ74 1663 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 C9orf84Q5VXU9 1444 aa3.36□□□□□ -1.87
SCFD1-210ENST00000553693 TRAPPC8Q9Y2L5 1435 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms