RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GKN1Q9NS71 199 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 ERAP1Q9NZ08 941 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 PPIEQ9UNP9 301 aaKnown RBP2.88□□□□□ -1.95
VRK1-202ENST00000553683 PCDH11YQ9BZA8 1340 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 A0A1W2PPQ1 181 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 FEZF1A0PJY2 475 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 C2orf81A6NN90 581 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 KPNA7A9QM74 516 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 EIF5BO60841 1220 aaKnown RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 ERAL1O75616 437 aaKnown RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 TOMM70O94826 608 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 PGM3O95394 542 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 IGHV2-70P01814 119 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 HSPA8P11142 646 aaKnown RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 PFKFB1P16118 471 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 TPD52P55327 224 aaPredicted RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 KLC1Q07866 573 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 SLC1A5Q15758 541 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 SNAPC1Q16533 368 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 SYT14P1Q58G82 188 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 WLSQ5T9L3 541 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 GARNL3Q5VVW2 1013 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 PRR27Q6MZM9 219 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 C11orf63Q6NUN7 778 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 Q6ZSR9 355 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 G2E3Q7L622 706 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 GTSCR1Q86UQ5 136 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 TMEM139Q8IV31 216 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 RAB42Q8N4Z0 105 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 DCLK2Q8N568 766 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 APPL2Q8NEU8 664 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 OR4C3Q8NH37 302 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 SFXN2Q96NB2 322 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 PYGO2Q9BRQ0 406 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 NUP85Q9BW27 656 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 UBXN6Q9BZV1 441 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 WWTR1Q9GZV5 400 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 FAM49AQ9H0Q0 323 aaPredicted RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 ATP13A3Q9H7F0 1226 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 ANKZF1Q9H8Y5 726 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 PDE7BQ9NP56 450 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 SLC35C2Q9NQQ7 365 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 OR6C2Q9NZP2 312 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 CACNG4Q9UBN1 327 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 ASIC3Q9UHC3 531 aa2.87□□□□□ -1.95
VRK1-202ENST00000553683 ZHX1Q9UKY1 873 aaPredicted RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 COL5A2P05997 1499 aaPredicted RBP2.87□□□□□ -1.95
VRK1-202ENST00000553683 IGKV3D-20A0A0C4DH25 116 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 NEMP2A6NFY4 417 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 K7ENM7 598 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 BEST1O76090 585 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 TBX6O95947 436 aaPredicted RBP2.86□□□□□ -1.95
VRK1-202ENST00000553683 NNMTP40261 264 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 MNDAP41218 407 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 SLC6A12P48065 614 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 LIG4P49917 911 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 GSCP56915 257 aaPredicted RBP2.86□□□□□ -1.95
VRK1-202ENST00000553683 CYCSP99999 105 aaKnown RBP2.86□□□□□ -1.95
VRK1-202ENST00000553683 DMPKQ09013 629 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 TNIP1Q15025 636 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 HLA-BQ31612 363 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 SLC35D3Q5M8T2 416 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 TMEM211Q6ICI0 200 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 PRPF39Q86UA1 669 aaKnown RBP2.86□□□□□ -1.95
VRK1-202ENST00000553683 LINC00346Q8IVM7 164 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 CFAP206Q8IYR0 622 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 CFAP61Q8NHU2 1237 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 NSMCE3Q96MG7 304 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 AGAP3Q96P47 875 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 OLFM1Q99784 485 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 CLEC7AQ9BXN2 247 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 S1PR5Q9H228 398 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 OPA3Q9H6K4 179 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 PPANQ9NQ55 473 aaKnown RBP2.86□□□□□ -1.95
VRK1-202ENST00000553683 TAB2Q9NYJ8 693 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 ANAPC2Q9UJX6 822 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 ABT1Q9ULW3 272 aaKnown RBP2.86□□□□□ -1.95
VRK1-202ENST00000553683 WDR37Q9Y2I8 494 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 RIPK3Q9Y572 518 aa2.86□□□□□ -1.95
VRK1-202ENST00000553683 SYNDIG1LA6NDD5 238 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 ENO4A6NNW6 628 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 GJB3O75712 270 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 NXPH2O95156 264 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 BCL10O95999 233 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 RAB40ALP0C0E4 278 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 ASCL1P50553 236 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 CDH13P55290 713 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 LMOD3Q0VAK6 560 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 ITGA7Q13683 1181 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 PTPRCAPQ14761 206 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 LPAL2Q16609 132 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 CA9Q16790 459 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 SPDYCQ5MJ68 293 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 BSPRYQ5W0U4 402 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 LYSMD4Q5XG99 296 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 LACC1Q8IV20 430 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 NDUFAF2Q8N183 169 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 ZNF843Q8N446 348 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 TTC30BQ8N4P2 665 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 OR13C3Q8NGS6 347 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms