RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NOL6Q9H6R4 1146 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 UBE2TQ9NPD8 197 aaPredicted RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 RAD18Q9NS91 495 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 FAM207AQ9NSI2 230 aaPredicted RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 IL1RAPL1Q9NZN1 696 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ATXN10Q9UBB4 475 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 CNOT6Q9ULM6 557 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 NPIPA1Q9UND3 350 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ZKSCAN5Q9Y2L8 839 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 COLEC10Q9Y6Z7 277 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 FBN1P35555 2871 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 NKX2-6A6NCS4 301 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 OR6C74A6NCV1 312 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 OR52A4PA6NMU1 304 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FAM72CH0Y354 149 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 H7C1Q1 480 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 J3KR12 359 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FGF10O15520 208 aaPredicted RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 OR2B3O76000 313 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 CDK14O94921 469 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 BMP10O95393 424 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SOD1P00441 154 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 HPP00738 406 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ERBB2P04626 1255 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 UMODP07911 640 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF8P17098 575 aaPredicted RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 CD68P34810 354 aaPredicted RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 HTR7P34969 479 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 CARSP49589 748 aaKnown RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 BPIFB4P59827 614 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 PPP1CAP62136 330 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TFF3Q07654 80 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ABRQ12979 859 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 KRT33BQ14525 404 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 PCBP2Q15366 365 aaKnown RBP eCLIP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF569Q5MCW4 686 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FAM72AQ5TYM5 149 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ABHD17BQ5VST6 288 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF385CQ66K41 422 aaPredicted RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 LRRC66Q68CR7 880 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TXNRD3NBQ6F5E7 133 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FAM72DQ6L9T8 149 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 PAMR1Q6UXH9 720 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SLCO4C1Q6ZQN7 724 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 OVCH1Q7RTY7 1134 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SLFN11Q7Z7L1 901 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 LRRTM4Q86VH4 590 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FAM72BQ86X60 149 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ZZZ3Q8IYH5 903 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FAM98AQ8NCA5 519 aaKnown RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 FAM222BQ8WU58 562 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 NSMCE1Q8WV22 266 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 RNF141Q8WVD5 230 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 KAT5Q92993 513 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SLC35C1Q96A29 364 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 ISL2Q96A47 359 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 HSPBAP1Q96EW2 488 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TMX3Q96JJ7 454 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 CFAP57Q96MR6 1250 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TTC25Q96NG3 672 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 PSKH2Q96QS6 385 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 MCCC1Q96RQ3 725 aaPredicted RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 USP28Q96RU2 1077 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 AGAP2Q99490 1192 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 GPATCH1Q9BRR8 931 aaKnown RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TIMM29Q9BSF4 260 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SPRTNQ9H040 489 aaPredicted RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 OR2AG1Q9H205 316 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 WDR54Q9H977 334 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SPTLC3Q9NUV7 552 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 PLA2G2EQ9NZK7 142 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 LRFN1Q9P244 771 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 PTGFRNQ9P2B2 879 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 TRPS1Q9UHF7 1281 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 NXT1Q9UKK6 140 aaKnown RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 DNAJC16Q9Y2G8 782 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 SF3B6Q9Y3B4 125 aaKnown RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 NYNRINQ9P2P1 1898 aaKnown RBP4.96□□□□□ -1.62
CKAP4-203ENST00000553039 GTF3C1Q12789 2109 aa4.96□□□□□ -1.62
CKAP4-203ENST00000553039 INTS1Q8N201 2190 aaKnown RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 CACNA1CQ13936 2221 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 OR5H15A6NDH6 313 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 NPIPB15A6NHN6 443 aaPredicted RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 A6NNC1 897 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 FAM90A27PA6NNH2 459 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ADAM10O14672 748 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 CHUKO15111 745 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 DAPK3O43293 454 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SPRY1O43609 319 aaPredicted RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PGLSO95336 258 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 WDPCPO95876 746 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 HRGP04196 525 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SERPINA7P05543 415 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 LHCGRP22888 699 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 CXCR2P25025 360 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SERPINB3P29508 390 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 EEF1DP29692 281 aaKnown RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SDC4P31431 198 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 RGRP47804 291 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms