RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ERVPABLB-1P60509 514 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 MC2RQ01718 297 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 KCNAB1Q14722 419 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 FAM153CQ494X1 144 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 ANKS6Q68DC2 871 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 SPESP1Q6UW49 350 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 UBE2R2Q712K3 238 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-226ENST00000553011 CEP97Q8IW35 865 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 FAM20CQ8IXL6 584 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 OR9A1PQ8NGU1 263 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 MAGEC3Q8TD91 643 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 DLG3Q92796 817 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 FGF11Q92914 225 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 MRRFQ96E11 262 aaKnown RBP13.65□□□□□ -0.22
PTCH1-226ENST00000553011 TAAR9Q96RI9 348 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 PKP4Q99569 1192 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 KLHL25Q9H0H3 589 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 ADAMTS6Q9UKP5 1117 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 ZMIZ1Q9ULJ6 1067 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 RAXQ9Y2V3 346 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 B3GALT1Q9Y5Z6 326 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
PTCH1-226ENST00000553011 MYO1CO00159 1063 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 NVLO15381 856 aaKnown RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 ZBTB11O95625 1053 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 EBLN1P0CF75 366 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 MYBL2P10244 700 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 FOLR1P15328 257 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 ZNF37AP17032 561 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 PHBP35232 272 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 ARL4DP49703 201 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 IL2P60568 153 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 POU4F1Q01851 419 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 FOXM1Q08050 763 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 NAB1Q13506 487 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 FASTKQ14296 549 aaKnown RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 KIR2DS3Q14952 304 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 GRTP1Q5TC63 336 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 LRRC8EQ6NSJ5 796 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 MYO1HQ8N1T3 1032 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 FBXO15Q8NCQ5 510 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 UHMK1Q8TAS1 419 aaKnown RBP13.64□□□□□ -0.23
PTCH1-226ENST00000553011 RNF31Q96EP0 1072 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 TRAPPC9Q96Q05 1148 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 GPR22Q99680 433 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 RAB11FIP5Q9BXF6 653 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 ACSS3Q9H6R3 686 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 FBXO8Q9NRD0 319 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 SOHLH2Q9NX45 425 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 SPATA7Q9P0W8 599 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 IKZF3Q9UKT9 509 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 ZZEF1O43149 2961 aa13.64□□□□□ -0.23
PTCH1-226ENST00000553011 CELSR3Q9NYQ7 3312 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 PHGDHO43175 533 aaKnown RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 ZBTB14O43829 449 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 SYF2O95926 243 aaKnown RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 ERGP11308 486 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 MAP4P27816 1152 aaKnown RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 PSMB5P28074 263 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 PCBP4P57723 403 aaKnown RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 HSD11B2P80365 405 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 USP10Q14694 798 aaKnown RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 SLMAPQ14BN4 828 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 CYP2A13Q16696 494 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 PHKG1Q16816 387 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 ST3GAL2Q16842 350 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 SLC5A12Q1EHB4 618 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 ZFAND4Q86XD8 727 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 KMT5CQ86Y97 462 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 CARFQ8N187 725 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 D2HGDHQ8N465 521 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 RAB42Q8N4Z0 105 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 ANKRD49Q8WVL7 239 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 NAF1Q96HR8 494 aaKnown RBP13.63□□□□□ -0.23
PTCH1-226ENST00000553011 OR6C1Q96RD1 312 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 CYTH2Q99418 400 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 DDA1Q9BW61 102 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 FUT8Q9BYC5 575 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 ANKZF1Q9H8Y5 726 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 LNPEPQ9UIQ6 1025 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 PDE10AQ9Y233 779 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 BTRCQ9Y297 605 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 PCDHGA3Q9Y5H0 932 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 FER1L5A0AVI2 2057 aa13.63□□□□□ -0.23
PTCH1-226ENST00000553011 KMT2BQ9UMN6 2715 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-226ENST00000553011 A0A0J9YY10 115 aa13.62□□□□□ -0.23
PTCH1-226ENST00000553011 A0A1W2PPV9 198 aa13.62□□□□□ -0.23
PTCH1-226ENST00000553011 POLR1CO15160 346 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-226ENST00000553011 PRICKLE3O43900 615 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-226ENST00000553011 WISP3O95389 354 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-226ENST00000553011 SLU7O95391 586 aaKnown RBP13.62□□□□□ -0.23
PTCH1-226ENST00000553011 SLC16A8O95907 504 aa13.62□□□□□ -0.23
PTCH1-226ENST00000553011 C8GP07360 202 aa13.62□□□□□ -0.23
PTCH1-226ENST00000553011 PNLIPRP1P54315 467 aa13.62□□□□□ -0.23
PTCH1-226ENST00000553011 SLC12A2P55011 1212 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms