RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 FJX1Q86VR8 437 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 PARP9Q8IXQ6 854 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 THOC3Q96J01 351 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ALS2CR12Q96Q35 445 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 CHP1Q99653 195 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 SLX1AQ9BQ83 275 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 SLC26A1Q9H2B4 701 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 C10orf88Q9H8K7 445 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ARNT2Q9HBZ2 717 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 SEMA3GQ9NS98 782 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ABHD10Q9NUJ1 306 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 NLE1Q9NVX2 485 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 SMARCAL1Q9NZC9 954 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 HS3ST3B1Q9Y662 390 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 CSMD2Q7Z408 3487 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 CELSR1Q9NYQ6 3014 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 SYCE3A1L190 88 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 MACROD2A1Z1Q3 448 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 CCDC78A2IDD5 438 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 DSCR3O14972 297 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 ONECUT2O95948 504 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 MAGP20916 626 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 CTNNA2P26232 953 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 ACADLP28330 430 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 GCGRP47871 477 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 OTUD4Q01804 1114 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 BRD3Q15059 726 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 NKG7Q16617 165 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 DBN1Q16643 649 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 DENND5AQ6IQ26 1287 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 RPUSD3Q6P087 351 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 KIRREL2Q6UWL6 708 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 LINC00696Q6ZRV3 163 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 MCATQ8IVS2 390 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 TMEM151BQ8IW70 566 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 SLC22A18Q96BI1 424 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 SPSB2Q99619 263 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 LUC7LQ9NQ29 371 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 INTS7Q9NVH2 962 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 PLAGL1Q9UM63 463 aa13.62□□□□□ -0.23
CHMP1A-210ENST00000551981 ADGRG4Q8IZF6 3080 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 F8W8V4 182 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 KCNN4O15554 427 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 JRKO75564 520 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 ZNF189O75820 626 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 PRSS56P0CW18 603 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 TPBGLP0DKB5 382 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 PEBP1P30086 187 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 RAB28P51157 221 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 HADHBP55084 474 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 MFAP5Q13361 173 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 ART3Q13508 389 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 SPARCL1Q14515 664 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 ITIH4Q14624 930 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 GRM7Q14831 915 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 ZC3H12BQ5HYM0 836 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 TCTE1Q5JU00 501 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 DARS2Q6PI48 645 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 SHISA6Q6ZSJ9 500 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 TTC29Q8NA56 475 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 RELTQ969Z4 430 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 MAGEB10Q96LZ2 347 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 SPATA13Q96N96 652 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 LMF1Q96S06 567 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 SOX17Q9H6I2 414 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 CUTCQ9NTM9 273 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 IL1RAPL1Q9NZN1 696 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 SUCOQ9UBS9 1254 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 F8P00451 2351 aa13.61□□□□□ -0.23
CHMP1A-210ENST00000551981 SLC5A10A0PJK1 596 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 BHMG1C9JSJ3 638 aaPredicted RBP13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 CBFA2T2O43439 604 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 RPN2P04844 631 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 OR56A5P0C7T3 313 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 RBP3P10745 1247 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 PKLRP30613 574 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 MARCKSL1P49006 195 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 EIF3EP60228 445 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 COPS2P61201 443 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 ARG2P78540 354 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 INAQ16352 499 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 ZXDCQ2QGD7 858 aaPredicted RBP13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 DNAJC21Q5F1R6 531 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 PACS1Q6VY07 963 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 PIANPQ8IYJ0 282 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 OR11G2Q8NGC1 345 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 OR1N1Q8NGS0 311 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 CCDC110Q8TBZ0 833 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 ACTL9Q8TC94 416 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 CRB3Q9BUF7 120 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 GOLPH3Q9H4A6 298 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 IGSF5Q9NSI5 407 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 CTSFQ9UBX1 484 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 KLHL20Q9Y2M5 609 aa13.6□□□□□ -0.23
CHMP1A-210ENST00000551981 PRSS21Q9Y6M0 314 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms