RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	LIX1L	Q8IVB5	337 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	KBTBD2	Q8IY47	623 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	GPR135	Q8IZ08	494 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	UMODL1-AS1	Q8N2C9	162 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	GHDC	Q8N2G8	530 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	C3orf20	Q8ND61	904 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MAPK1IP1L	Q8NDC0	245 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	GIMAP7	Q8NHV1	300 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	FAM57A	Q8TBR7	257 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ZFPM2	Q8WW38	1151 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PIH1D2	Q8WWB5	315 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	SIGLEC12	Q96PQ1	595 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	C17orf62	Q9BQA9	187 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	AP1M1	Q9BXS5	423 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	NOD2	Q9HC29	1040 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	FAM60A	Q9NP50	221 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CTSF	Q9UBX1	484 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TMEM59L	Q9UK28	342 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	POMT2	Q9UKY4	750 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260	SMC3	Q9UQE7	1217 aa		5.64	□□□□□ -1.51
RACGAP1-223	ENST00000551260		A0A0G2JK05	382 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	GSAP	A4D1B5	854 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	IDS	B3KWA1	339 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CHUK	O15111	745 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	USP1	O94782	785 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	SLC25A14	O95258	325 aa	Predicted RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PGLS	O95336	258 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PYGL	P06737	847 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CD63	P08962	238 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MSL3P1	P0C860	447 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	NTF4	P34130	210 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	HAL	P42357	657 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	NR0B1	P51843	470 aa	Known RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MAX	P61244	160 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	APBA1	Q02410	837 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	GCNT1	Q02742	428 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TFDP3	Q5H9I0	405 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	HENMT1	Q5T8I9	393 aa	Known RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ALS2CL	Q60I27	953 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ATG9B	Q674R7	924 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	FCRLB	Q6BAA4	426 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	BHLHB9	Q6PI77	547 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	LRRTM4	Q86VH4	590 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	HIPK1	Q86Z02	1210 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MCAT	Q8IVS2	390 aa	Known RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PRSS58	Q8IYP2	241 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	LINC00301	Q8NCQ3	95 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	RNF214	Q8ND24	703 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	OR4E2	Q8NGC2	313 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PROKR1	Q8TCW9	393 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	SLC20A1	Q8WUM9	679 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TEKT4	Q8WW24	435 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ISL2	Q96A47	359 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TMX3	Q96JJ7	454 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TIMM29	Q9BSF4	260 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	UBE2T	Q9NPD8	197 aa	Predicted RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	METTL5	Q9NRN9	209 aa	Known RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TXLNG	Q9NUQ3	528 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	IMP3	Q9NV31	184 aa	Known RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ANKRD10	Q9NXR5	420 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PPIL1	Q9Y3C6	166 aa		5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.63	□□□□□ -1.51
RACGAP1-223	ENST00000551260	HEATR5B	Q9P2D3	2071 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	DOCK7	Q96N67	2140 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	FREM1	Q5H8C1	2179 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MALRD1	Q5VYJ5	2156 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260		A0A087X1B8	175 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260		A0A1B0GTH9	108 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ASPDH	A6ND91	283 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	BTN3A3	O00478	584 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CLDN4	O14493	209 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MAP2K7	O14733	419 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ZSCAN9	O15535	394 aa	Predicted RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TTI1	O43156	1089 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	SOCS5	O75159	536 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CNOT4	O95628	575 aa	Known RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MTHFD1	P11586	935 aa	Known RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	COX6A1	P12074	109 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	BMP7	P18075	431 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PRDX3	P30048	256 aa	Known RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PTGS2	P35354	604 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	GABRA4	P48169	554 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	PMS1	P54277	932 aa	Known RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	EEF1A2	Q05639	463 aa	Known RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ZNF33B	Q06732	778 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	DMTN	Q08495	405 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CDK5R2	Q13319	367 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	IHH	Q14623	411 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	ZIC1	Q15915	447 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	CCDC14	Q49A88	953 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	FILIP1L	Q4L180	1135 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	FLYWCH1	Q4VC44	716 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	EMC4	Q5J8M3	183 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	MEI1	Q5TIA1	1274 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TMEM211	Q6ICI0	200 aa		5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	TIGD7	Q6NT04	549 aa	Predicted RBP	5.62	□□□□□ -1.51
RACGAP1-223	ENST00000551260	NEK10	Q6ZWH5	1172 aa		5.62	□□□□□ -1.51

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