RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 PCMTD2Q9NV79 361 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 SPATA7Q9P0W8 599 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 STOX2Q9P2F5 926 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 PDP2Q9P2J9 529 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 EPHA6Q9UF33 1036 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 OARD1Q9Y530 152 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 D6RAR5 112 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 E7ENX8 843 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 AGPSO00116 658 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 DUX1O43812 170 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 KIF1CO43896 1103 aaKnown RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 MT-CO3P00414 261 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 C9P02748 559 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 ENO2P09104 434 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 COL6A2P12110 1019 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 MTHFD2P13995 350 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 CREB1P16220 341 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 CYP2A7P20853 494 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 MAP4P27816 1152 aaKnown RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 KPNA2P52292 529 aaKnown RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 PNLIPRP1P54315 467 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 TAP2Q03519 686 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 SLC18A2Q05940 514 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 ZFP36L1Q07352 338 aaKnown RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 SPIDRQ14159 915 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 FAM83EQ2M2I3 478 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 C18orf21Q32NC0 220 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 KRT71Q3SY84 523 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 TECRLQ5HYJ1 363 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 C16orf46Q6P387 395 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 TMEM71Q6P5X7 295 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 CDHR3Q6ZTQ4 885 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 ADAMTSL2Q86TH1 951 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 SLITRK4Q8IW52 837 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 AHCYL2Q96HN2 611 aaKnown RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 CABS1Q96KC9 395 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 TMEM216Q9P0N5 145 aa12.62□□□□□ -0.39
RAB5C-206ENST00000550406 MN1Q10571 1320 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-206ENST00000550406 IGHV5-10-1A0A0J9YXX1 117 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 TARM1B6A8C7 271 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 TAPBPO15533 448 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 GUCA1CO95843 209 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 CDK4P11802 303 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 KRT15P19012 456 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 KCNA4P22459 653 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 PSMB5P28074 263 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 PRDX3P30048 256 aaKnown RBP12.61□□□□□ -0.39
RAB5C-206ENST00000550406 AP1S2P56377 157 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 YBX1P67809 324 aaKnown RBP12.61□□□□□ -0.39
RAB5C-206ENST00000550406 CDKL1Q00532 357 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 ARHGAP19Q14CB8 494 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 ACAP2Q15057 778 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 TGFBIQ15582 683 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
RAB5C-206ENST00000550406 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 ANKS6Q68DC2 871 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 AGTRAPQ6RW13 159 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 SUSD1Q6UWL2 747 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 TAX1BP1Q86VP1 789 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 OOSP2Q86WS3 158 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 GPSM1Q86YR5 675 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 FAM20CQ8IXL6 584 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 OR4D9Q8NGE8 314 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 RHEBL1Q8TAI7 183 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 RHBDF1Q96CC6 855 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 FBXL8Q96CD0 374 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 TGM7Q96PF1 710 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 ATG10Q9H0Y0 220 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 C12orf65Q9H3J6 166 aaKnown RBP12.61□□□□□ -0.39
RAB5C-206ENST00000550406 SYNDIG1Q9H7V2 258 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 ARL15Q9NXU5 204 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 ACTR10Q9NZ32 417 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 SEMA5BQ9P283 1151 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 LNPEPQ9UIQ6 1025 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 EMCNQ9ULC0 261 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 WASF3Q9UPY6 502 aa12.61□□□□□ -0.39
RAB5C-206ENST00000550406 MDC1Q14676 2089 aaKnown RBP12.6□□□□□ -0.39
RAB5C-206ENST00000550406 PIPSLA2A3N6 862 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 UBXN8O00124 270 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 MAP2K7O14733 419 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 ZW10O43264 779 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 KERAO60938 352 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 HIST1H2AGP0C0S8 130 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-206ENST00000550406 THRAP10827 490 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 UGT2B7P16662 529 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 HIST1H2ADP20671 130 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 IRGCQ6NXR0 463 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 KLHL35Q6PF15 583 aa12.6□□□□□ -0.39
RAB5C-206ENST00000550406 RBM44Q6ZP01 1051 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms