RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 ATG16L1Q676U5 607 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ANKS6Q68DC2 871 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 SUSD1Q6UWL2 747 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 FAM47EQ6ZV65 393 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 TCAIMQ8N3R3 496 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 SDR16C5Q8N3Y7 309 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 SFRP1Q8N474 314 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ARL14Q8N4G2 192 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 RAB42Q8N4Z0 105 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 MINDY1Q8N5J2 469 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 TEX9Q8N6V9 391 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 SUMF1Q8NBK3 374 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 UBTD2Q8WUN7 234 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ZNF480Q8WV37 535 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 LCN9Q8WX39 176 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ATL1Q8WXF7 558 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ZNF75CPQ92670 426 aaPredicted RBP7.9□□□□□ -1.14
GPN3-207ENST00000550228 PYCR2Q96C36 320 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 L3HYPDHQ96EM0 354 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ERVK-6Q9BXR3 956 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 PITPNM3Q9BZ71 974 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 SHCBP1LQ9BZQ2 653 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 GSTO2Q9H4Y5 243 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 STN1Q9H668 368 aaKnown RBP7.9□□□□□ -1.14
GPN3-207ENST00000550228 KIR3DX1Q9H7L2 352 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ZNF395Q9H8N7 513 aaPredicted RBP7.9□□□□□ -1.14
GPN3-207ENST00000550228 SEMA4BQ9NPR2 832 aaPredicted RBP7.9□□□□□ -1.14
GPN3-207ENST00000550228 POT1Q9NUX5 634 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 SPATA7Q9P0W8 599 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 NCDNQ9UBB6 729 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 OPTCQ9UBM4 332 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 LNPEPQ9UIQ6 1025 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 PCTPQ9UKL6 214 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ICKQ9UPZ9 632 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 ANGPTL3Q9Y5C1 460 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 CSNK1G3Q9Y6M4 447 aa7.9□□□□□ -1.14
GPN3-207ENST00000550228 CACNA1HO95180 2353 aa7.9□□□□□ -1.15
GPN3-207ENST00000550228 LNP1A1A4G5 178 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ZNF839A8K0R7 811 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 TMEM114B3SHH9 223 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 K7EPI3 171 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 TRIM38O00635 465 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ITM2AO43736 263 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 KDM1AO60341 852 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 CHRNGP07510 517 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 VIMP08670 466 aaKnown RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 GIMD1P0DJR0 217 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ALPPL2P10696 532 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 XRCC1P18887 633 aaPredicted RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 PSMB5P28074 263 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 SLC6A12P48065 614 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 SLC1A6P48664 564 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 HNMTP50135 292 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 RAB28P51157 221 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ABCE1P61221 599 aaKnown RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 GTF2H2Q13888 395 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 RCN2Q14257 317 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 PCBP2Q15366 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
GPN3-207ENST00000550228 ZXDCQ2QGD7 858 aaPredicted RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 C14orf28Q4W4Y0 310 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 THEMIS2Q5TEJ8 643 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 PRAMEF13Q5VWM6 474 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 FAM219BQ5XKK7 198 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 CAPN13Q6MZZ7 669 aaPredicted RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 GTF2H2CQ6P1K8 395 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 FRMD7Q6ZUT3 714 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 LRRC70Q7Z2Q7 622 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 KANSL1Q7Z3B3 1105 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 GOLGA7Q7Z5G4 137 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 THOC6Q86W42 341 aaKnown RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 SLC35F3Q8IY50 421 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 EID2Q8N6I1 236 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 OR4E2Q8NGC2 313 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 OR10G6Q8NH81 332 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 RAB3IL1Q8TBN0 382 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 AGR3Q8TD06 166 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 SAP25Q8TEE9 199 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 TRPC4APQ8TEL6 797 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ZNF483Q8TF39 744 aaPredicted RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 SH3KBP1Q96B97 665 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ACAT2Q9BWD1 397 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 RAB11FIP5Q9BXF6 653 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 TBC1D10AQ9BXI6 508 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 CD244Q9BZW8 370 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 SRMSQ9H3Y6 488 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 RABEP2Q9H5N1 569 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 SLC40A1Q9NP59 571 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 CCDC177Q9NQR7 707 aaPredicted RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 DNAJC11Q9NVH1 559 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 NLGN3Q9NZ94 848 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 ADAM21Q9UKJ8 722 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 TNPO3Q9Y5L0 923 aaKnown RBP7.89□□□□□ -1.15
GPN3-207ENST00000550228 PCM1Q15154 2024 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 GPR179Q6PRD1 2367 aa7.89□□□□□ -1.15
GPN3-207ENST00000550228 OR6C74A6NCV1 312 aa7.88□□□□□ -1.15
GPN3-207ENST00000550228 RHPN2P1A8MT19 583 aa7.88□□□□□ -1.15
GPN3-207ENST00000550228 E7ENX8 843 aa7.88□□□□□ -1.15
GPN3-207ENST00000550228 E2F3O00716 465 aa7.88□□□□□ -1.15
GPN3-207ENST00000550228 PPP6CO00743 305 aa7.88□□□□□ -1.15
GPN3-207ENST00000550228 PPM1DO15297 605 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms