RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 AFTPHQ6ULP2 937 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 ASB18Q6ZVZ8 466 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 TAS2R42Q7RTR8 314 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 SNX20Q7Z614 316 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 D2HGDHQ8N465 521 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 MREGQ8N565 214 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 ZNF501Q96CX3 271 aaPredicted RBP13.01□□□□□ -0.33
NUP188-211ENST00000550219 FCRL4Q96PJ5 515 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 NRTNQ99748 197 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 HGH1Q9BTY7 390 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 KLHL25Q9H0H3 589 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 SRMSQ9H3Y6 488 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 TLK1Q9UKI8 766 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 HEBP2Q9Y5Z4 205 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 BSNQ9UPA5 3926 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
NUP188-211ENST00000550219 TRBV5-4A0A0C4DH59 114 aa13□□□□□ -0.33
NUP188-211ENST00000550219 TCRBV9S1A1TA0A576 114 aa13□□□□□ -0.33
NUP188-211ENST00000550219 KLHL33A6NCF5 533 aa13□□□□□ -0.33
NUP188-211ENST00000550219 ARGFXA6NJG6 315 aa13□□□□□ -0.33
NUP188-211ENST00000550219 SLC9B1P1A6NJY1 282 aa13□□□□□ -0.33
NUP188-211ENST00000550219 IFRD1O00458 451 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 RIPK2O43353 540 aa13□□□□□ -0.33
NUP188-211ENST00000550219 ERLIN1O75477 346 aa13□□□□□ -0.33
NUP188-211ENST00000550219 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
NUP188-211ENST00000550219 ATP1B2P14415 290 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 PTPN4P29074 926 aa13□□□□□ -0.33
NUP188-211ENST00000550219 PREPP48147 710 aa13□□□□□ -0.33
NUP188-211ENST00000550219 CDKN1CP49918 316 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 MLLT10P55197 1068 aa13□□□□□ -0.33
NUP188-211ENST00000550219 PRAMEP78395 509 aa13□□□□□ -0.33
NUP188-211ENST00000550219 ABRQ12979 859 aa13□□□□□ -0.33
NUP188-211ENST00000550219 UAP1Q16222 522 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 GPR33Q49SQ1 333 aa13□□□□□ -0.33
NUP188-211ENST00000550219 BEND6Q5SZJ8 279 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 TCTN3Q6NUS6 607 aa13□□□□□ -0.33
NUP188-211ENST00000550219 BPHLQ86WA6 291 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 CNTN4Q8IWV2 1026 aa13□□□□□ -0.33
NUP188-211ENST00000550219 LMNTD2Q8IXW0 634 aa13□□□□□ -0.33
NUP188-211ENST00000550219 ACVR1CQ8NER5 493 aa13□□□□□ -0.33
NUP188-211ENST00000550219 OR4L1Q8NH43 312 aa13□□□□□ -0.33
NUP188-211ENST00000550219 LCN9Q8WX39 176 aa13□□□□□ -0.33
NUP188-211ENST00000550219 CLIP3Q96DZ5 547 aa13□□□□□ -0.33
NUP188-211ENST00000550219 CERS2Q96G23 380 aa13□□□□□ -0.33
NUP188-211ENST00000550219 LINC00615Q96LM1 132 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 CCM2Q9BSQ5 444 aa13□□□□□ -0.33
NUP188-211ENST00000550219 CHST8Q9H2A9 424 aa13□□□□□ -0.33
NUP188-211ENST00000550219 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
NUP188-211ENST00000550219 C20orf96Q9NUD7 363 aaPredicted RBP13□□□□□ -0.33
NUP188-211ENST00000550219 ZDHHC3Q9NYG2 299 aa13□□□□□ -0.33
NUP188-211ENST00000550219 SPTA1P02549 2419 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 OR51F1A6NGY5 319 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 FAM159BA6NKW6 160 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 TMEM150CB9EJG8 249 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 BTN3A1O00481 513 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 PDGFAP04085 211 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 ERVK-10P10266 1014 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 PVRP15151 417 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 STX2P32856 288 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 PHBP35232 272 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 CACNG1Q06432 222 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 MGAT5Q09328 741 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 UGT8Q16880 541 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 CAPRIN2Q6IMN6 1127 aaKnown RBP12.99□□□□□ -0.33
NUP188-211ENST00000550219 NEPROQ6NW34 567 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 KCNMB4Q86W47 210 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 SERPINA9Q86WD7 417 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 PIANPQ8IYJ0 282 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 PHC3Q8NDX5 983 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 OR6P1Q8NGX9 317 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 FBF1Q8TES7 1133 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 HEXDCQ8WVB3 486 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 ZFPM2Q8WW38 1151 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 GPR87Q9BY21 358 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 SLC7A5P2Q9GIP4 190 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 XKR8Q9H6D3 395 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 IL1RAPL1Q9NZN1 696 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 MARCH4Q9P2E8 410 aaPredicted RBP12.99□□□□□ -0.33
NUP188-211ENST00000550219 SNX7Q9UNH6 387 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 BTRCQ9Y297 605 aa12.99□□□□□ -0.33
NUP188-211ENST00000550219 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 GOLGA8KD6RF30 607 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 MATN2O00339 956 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 BTN3A3O00478 584 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 CD3EAPO15446 510 aaKnown RBP12.98□□□□□ -0.33
NUP188-211ENST00000550219 ACSL3O95573 720 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 KLK3P07288 261 aaPredicted RBP12.98□□□□□ -0.33
NUP188-211ENST00000550219 UQCRHP07919 91 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 ST6GAL1P15907 406 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 CYP2A7P20853 494 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 ACRV1P26436 265 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 PDHA2P29803 388 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms