RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FBXL4Q9UKA2 621 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 ASF1AQ9Y294 204 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 MYO7BQ6PIF6 2116 aa9.46□□□□□ -0.89
TRAFD1-207ENST00000550051 CSMD1Q96PZ7 3565 aa9.46□□□□□ -0.89
TRAFD1-207ENST00000550051 SVILO95425 2214 aa9.46□□□□□ -0.89
TRAFD1-207ENST00000550051 SLC5A10A0PJK1 596 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ISM1B1AKI9 464 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 H7C0C1 242 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 KDM1AO60341 852 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ZG16O60844 167 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 TPM3P06753 285 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ITGAXP20702 1163 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 NSG1P42857 185 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ATP5OP48047 213 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 FOXL2P58012 376 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 COPS2P61201 443 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 CDC16Q13042 620 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ART3Q13508 389 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 OLIG2Q13516 323 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 SLC9A5Q14940 896 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 NKG7Q16617 165 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 DEFB110Q30KQ9 67 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 IRAK1BP1Q5VVH5 260 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF324BQ6AW86 544 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 PIANPQ8IYJ0 282 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 HAUS1Q96CS2 278 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 VPS50Q96JG6 964 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 SPSB2Q99619 263 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 HEMGNQ9BXL5 484 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 UNKQ9C0B0 810 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 C10orf88Q9H8K7 445 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 LUC7LQ9NQ29 371 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 SEMA3GQ9NS98 782 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 ABHD10Q9NUJ1 306 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 CDC23Q9UJX2 597 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 HS3ST3B1Q9Y662 390 aa9.46□□□□□ -0.9
TRAFD1-207ENST00000550051 PDZD2O15018 2839 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 A0A1B0GX78 115 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 ARHGAP10A1A4S6 786 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 VSTM2BA6NLU5 285 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 CCL22O00626 93 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 DSCR3O14972 297 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 FTH1P02794 183 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 PSMB4P28070 264 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 PEBP1P30086 187 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 RIPPLY3P57055 190 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 OTUD4Q01804 1114 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 CACNG1Q06432 222 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 MFAP5Q13361 173 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 ITIH4Q14624 930 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 NAA30Q147X3 362 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 DBN1Q16643 649 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 ZC3H12BQ5HYM0 836 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 KCTD11Q693B1 232 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 ISLR2Q6UXK2 745 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 PACS1Q6VY07 963 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 TTLL10Q6ZVT0 673 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 TAS2R42Q7RTR8 314 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 MCEMP1Q8IX19 187 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 OR11G2Q8NGC1 345 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 ACTL9Q8TC94 416 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 STYXQ8WUJ0 223 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 SLC22A18Q96BI1 424 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 LRRC45Q96CN5 670 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 DNAJC1Q96KC8 554 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 SPATA13Q96N96 652 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF285Q96NJ3 590 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 TBL1YQ9BQ87 522 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 EPS8L2Q9H6S3 715 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 SMARCAL1Q9NZC9 954 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 COPG2Q9UBF2 871 aa9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 TDRKHQ9Y2W6 561 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 KLF2Q9Y5W3 355 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-207ENST00000550051 OTOGQ6ZRI0 2925 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 SYCE3A1L190 88 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CCDC78A2IDD5 438 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 FITM1A5D6W6 292 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 MROH6A6NGR9 719 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 TARM1B6A8C7 271 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 PRSS44E7EML9 344 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 PCDH17O14917 1159 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 KCNN4O15554 427 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 SRPX2O60687 465 aaPredicted RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 JRKO75564 520 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF189O75820 626 aaPredicted RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 KLHL18O94889 574 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 PRSS56P0CW18 603 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 RBP3P10745 1247 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CD9P21926 228 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 ANP32AP39687 249 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 RAB28P51157 221 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 EIF3EP60228 445 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 Q0VFX4 171 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 GRM7Q14831 915 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 PARP6Q2NL67 630 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms