RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 STEAP4Q687X5 459 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 NCEH1Q6PIU2 408 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 VN1R2Q8NFZ6 395 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 EEF1AKMT1Q8WVE0 214 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 GLYATL1Q969I3 302 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CPNE2Q96FN4 548 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 BTBD9Q96Q07 612 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 GPR62Q9BZJ7 368 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CSNK1G1Q9HCP0 422 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 MKKSQ9NPJ1 570 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 EIF2B4Q9UI10 523 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DMTF1Q9Y222 760 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TMEM5Q9Y2B1 443 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 OARD1Q9Y530 152 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SIPA1L3O60292 1781 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 MYH6P13533 1939 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 HYKKA2RU49 373 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 E7ESA3 106 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DUX1O43812 170 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ADAMTS4O75173 837 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 OR4F21O95013 312 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 RIPPLY1Q0D2K3 151 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 QPCTQ16769 361 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TRIM16LQ309B1 348 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 NDUFAF6Q330K2 333 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PIK3R6Q5UE93 754 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ZDHHC24Q6UX98 284 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CYP2R1Q6VVX0 501 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 THOC6Q86W42 341 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 KBTBD2Q8IY47 623 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DNASE1L2Q92874 299 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 RPL10LQ96L21 214 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ZNF382Q96SR6 550 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 NKX2-4Q9H2Z4 354 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PREBQ9HCU5 417 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 BCORQ6W2J9 1755 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ANKRD65E5RJM6 399 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SCAMP3O14828 347 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TMEM63AO94886 807 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CCNB2O95067 398 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SYN1P17600 705 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TGFBR2P37173 567 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 FEN1P39748 380 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 GRK6P43250 576 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TMED10P49755 219 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ARFIP1P53367 373 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 RPS15AP62244 130 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SLBPQ14493 270 aaKnown RBP eCLIP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 GPRC6AQ5T6X5 926 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PAMR1Q6UXH9 720 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 HFE2Q6ZVN8 426 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 FAM98AQ8NCA5 519 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 KLHL6Q8WZ60 621 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CENPNQ96H22 339 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TSSK3Q96PN8 268 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 KCNS3Q9BQ31 491 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 LRRC3Q9BY71 257 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PELI2Q9HAT8 420 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TCRBV7S2A1N4TA0A589 114 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DRGXA6NNA5 263 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PTGESO14684 152 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 KRT36O76013 467 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SEMA3DO95025 777 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 GJB5O95377 273 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ACP5P13686 325 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ACVRL1P37023 503 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TNFRSF4P43489 277 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 HNRNPKP61978 463 aaKnown RBP eCLIP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 USP46P62068 366 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 EMX2Q04743 252 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SF3B4Q15427 424 aaKnown RBP eCLIP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 KRT74Q7RTS7 529 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DENND6AQ8IWF6 608 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PQLC1Q8N2U9 271 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 C5orf34Q96MH7 638 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 MYOCQ99972 504 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DPYSL5Q9BPU6 564 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 SP140LQ9H930 580 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TRIM39Q9HCM9 518 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 PDE7BQ9NP56 450 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 B4GALT6Q9UBX8 382 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 AJAP1Q9UKB5 411 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ZNF831Q5JPB2 1677 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 RREB1Q92766 1687 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 A0A1W2PRB8 838 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 RGS5O15539 181 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 DFNA5O60443 496 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ECI2O75521 394 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CFIP05156 583 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 CCDC159P0C7I6 412 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ACRV1P26436 265 aa9.04□□□□□ -0.96
PPFIA2-216ENST00000549396 ITPKBP27987 946 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms