RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 GORASP2Q9H8Y8 452 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 IL23AQ9NPF7 189 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 SLC8A2Q9UPR5 921 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 DMTF1Q9Y222 760 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 NUP214P35658 2090 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 TRBV5-3A0A0A0MS03 114 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 TMEM202A6NGA9 273 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 CCDC160A6NGH7 325 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 OR2AG2A6NM03 316 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 SLC16A5O15375 505 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 CYP2A7P20853 494 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 WEE1P30291 646 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 CLDN8P56748 225 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 SP140Q13342 867 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 CYBRD1Q53TN4 286 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 RIOK2Q9BVS4 552 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 PAIP1Q9H074 479 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 SMPD3Q9NY59 655 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 FAM8A1Q9UBU6 413 aa18.05■□□□□ 0.48
PRPF40B-208ENST00000548436 UPK3BL1B0FP48 263 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 UPK3BL2E5RIL1 263 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 H3BSA7 217 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 RAP2AP10114 183 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 PCNAP12004 261 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 DCDC1P59894 354 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 PFN3P60673 137 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 POM121L1PQ3SYA9 428 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 HENMT1Q5T8I9 393 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 TMEM214Q6NUQ4 689 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 ENPP6Q6UWR7 440 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 RASGRP3Q8IV61 690 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 PHACTR4Q8IZ21 702 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 RNF175Q8N4F7 328 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 AADATQ8N5Z0 425 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 HM13Q8TCT9 377 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 MCOLN3Q8TDD5 553 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 TMIGD2Q96BF3 282 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 APIPQ96GX9 242 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 TSSK3Q96PN8 268 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 TBCDQ9BTW9 1192 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 SOX17Q9H6I2 414 aaPredicted RBP18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 SERHLQ9NQF3 203 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 DNAJC11Q9NVH1 559 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 CXXC1Q9P0U4 656 aaPredicted RBP18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 TBC1D14Q9P2M4 693 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 INSL6Q9Y581 213 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 PCDHB14Q9Y5E9 798 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 LRRK1Q38SD2 2015 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 CHD7Q9P2D1 2997 aa18.04■□□□□ 0.48
PRPF40B-208ENST00000548436 PABPN1LA6NDY0 278 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 CFAP99D6REC4 459 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 KPNA5O15131 536 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 GSTA4O15217 222 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 SNAP29O95721 258 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 FGF19O95750 216 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 B3GALT4O96024 378 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 SDC1P18827 310 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 PRPH2P23942 346 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ALDH3B2P48448 385 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 NKG7Q16617 165 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 FAM98BQ52LJ0 330 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 BORAQ6PGQ7 559 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 TTC33Q6PID6 262 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 HOMEZQ8IX15 550 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 SLC22A15Q8IZD6 547 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 C10orf111Q8N326 155 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ZNF786Q8N393 782 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ZNF557Q8N988 423 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 VCX3AQ9NNX9 186 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ADGRE2Q9UHX3 823 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 PPT2Q9UMR5 302 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 FADS3Q9Y5Q0 445 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 CEPT1Q9Y6K0 416 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 TSPAN11A1L157 253 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ELOVL7A1L3X0 281 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 GMNNO75496 209 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 SEC24DO94855 1032 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 SLCO2B1O94956 709 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 PRSS23O95084 383 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 PRPS2P11908 318 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 SYN1P17600 705 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 CAPGP40121 348 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 AP1S2P56377 157 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 NEK10Q6ZWH5 1172 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 OFCC1Q8IZS5 231 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 DHRSXQ8N5I4 330 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 TRAM1L1Q8N609 369 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ZNF366Q8N895 744 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 DDHD1Q8NEL9 900 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 FBXO30Q8TB52 745 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 POF1BQ8WVV4 589 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 ASZ1Q8WWH4 475 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 CMTM7Q96FZ5 175 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 AURKBQ96GD4 344 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 EGLN2Q96KS0 407 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 INPP5KQ9BT40 448 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 KAT8Q9H7Z6 458 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 CD320Q9NPF0 282 aa18.03■□□□□ 0.48
PRPF40B-208ENST00000548436 HPS4Q9NQG7 708 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms