RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 BNC2Q6ZN30 1099 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 TSPAN33Q86UF1 283 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 MARCH9Q86YJ5 346 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 TMEM126BQ8IUX1 230 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 DSELQ8IZU8 1212 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 PTGR2Q8N8N7 351 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 OR4C6Q8NH72 309 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 BIRC8Q96P09 236 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 GPR63Q9BZJ6 419 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 CYP4F12Q9HCS2 524 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 RNF112Q9ULX5 631 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 POMPQ9Y244 141 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 K7ESM1 405 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 FFAR2O15552 330 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 BUD23O43709 281 aaKnown RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 ALPIP09923 528 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 ELFN1P0C7U0 828 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 PIRTP0C851 137 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 MTHFD2P13995 350 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 ZNF7P17097 686 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 LCP2Q13094 533 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 PTPRCAPQ14761 206 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 GPR33Q49SQ1 333 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 PAQR3Q6TCH7 311 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 MACC1Q6ZN28 852 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 LARP4Q71RC2 724 aaKnown RBP eCLIP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 HSD11B1LQ7Z5J1 315 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 FBXO39Q8N4B4 442 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 TSPEARQ8WU66 669 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 DLG3Q92796 817 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 SCRN2Q96FV2 425 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 CATSPER2Q96P56 530 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 SLC25A23Q9BV35 468 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 C1QTNF7Q9BXJ2 289 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 KLHL42Q9P2K6 505 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 MSRB2Q9Y3D2 182 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 ZNF711Q9Y462 761 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 OR1A2Q9Y585 309 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 BBIP1A8MTZ0 92 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 PRMT5O14744 637 aaPredicted RBP16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 AIM2O14862 343 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 AZIN1O14977 448 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 LZTS3O60299 673 aaPredicted RBP16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 PCCBP05166 539 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 GFAPP14136 432 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 JUNDP17535 347 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 CTPS1P17812 591 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 VIPR1P32241 457 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 NUDT2P50583 147 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 CLDN6P56747 220 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 STX1BP61266 288 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 PEX6Q13608 980 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 PTK2BQ14289 1009 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 UGT3A2Q3SY77 523 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 SPATS1Q496A3 300 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 ZRANB3Q5FWF4 1079 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 ZDHHC20Q5W0Z9 365 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 METTL2BQ6P1Q9 378 aaKnown RBP16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 RFLNAQ6ZTI6 216 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 PIM3Q86V86 326 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 APLFQ8IW19 511 aaPredicted RBP16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 CLPTM1LQ96KA5 538 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 LYSMD1Q96S90 227 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 APOOQ9BUR5 198 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 LRRC61Q9BV99 259 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 CLPBQ9H078 707 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 P2RY12Q9H244 342 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 FKBPLQ9UIM3 349 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 LRCH1Q9Y2L9 728 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 DHRS7Q9Y394 339 aa16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 TNPO3Q9Y5L0 923 aaKnown RBP16.85■□□□□ 0.29
RBFOX1-207ENST00000547338 PSMD12O00232 456 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 TOR1BO14657 336 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 SCAMP1O15126 338 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 CAPNS1P04632 268 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 CELA2BP08218 269 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 MYF5P13349 255 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 HNF1BP35680 557 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 TRIM23P36406 574 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 HNRNPKP61978 463 aaKnown RBP eCLIP16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 OR4D1Q15615 310 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 ALG11Q2TAA5 492 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 KANK2Q63ZY3 851 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 DHRS13Q6UX07 377 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 PHACTR4Q8IZ21 702 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 ZNF570Q96NI8 536 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 GPR21Q99679 349 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 LGR4Q9BXB1 951 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 YY1AP1Q9H869 796 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 NLGN3Q9NZ94 848 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 MED16Q9Y2X0 877 aa16.84■□□□□ 0.29
RBFOX1-207ENST00000547338 CACNA1BQ00975 2339 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 ASXL3Q9C0F0 2248 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 A0A0J9YYE9 177 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 E5RI56 91 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 PEX1O43933 1283 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 CDK14O94921 469 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 CHEK2O96017 543 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 TRBC1P01850 177 aa16.83■□□□□ 0.28
RBFOX1-207ENST00000547338 SNRPB2P08579 225 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms