RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MAGEA12P43365 314 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 MAPK10P53779 464 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 IL2P60568 153 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 GBX1Q14549 363 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 LINC00303Q3SY05 128 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 ACSBG2Q5FVE4 666 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 METRNLQ641Q3 311 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 LRRC8EQ6NSJ5 796 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 TIFABQ6ZNK6 161 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 PIWIL4Q7Z3Z4 852 aaKnown RBP11.75□□□□□ -0.53
HDAC7-226ENST00000547259 CCDC91Q7Z6B0 441 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 TBC1D1Q86TI0 1168 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-226ENST00000547259 DTX1Q86Y01 620 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 VRK3Q8IV63 474 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 SLC22A15Q8IZD6 547 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 MYO1HQ8N1T3 1032 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 NKAPQ8N5F7 415 aaKnown RBP11.75□□□□□ -0.53
HDAC7-226ENST00000547259 GOLGA6L1Q8N7Z2 621 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 EXD3Q8N9H8 876 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 EXTL1Q92935 676 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 USP7Q93009 1102 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 PGM2Q96G03 612 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 CABS1Q96KC9 395 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 TSNARE1Q96NA8 513 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 TAAR9Q96RI9 348 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 ASPSCR1Q9BZE9 553 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 WWP1Q9H0M0 922 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 STMN4Q9H169 189 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-226ENST00000547259 TAAR2Q9P1P5 351 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 CDYLQ9Y232 598 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 ACOT9Q9Y305 439 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
HDAC7-226ENST00000547259 PRAMEF33A0A0G2JMD5 474 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 A0A1W2PPM1 405 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 PRR19A6NJB7 356 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 FOXO6A8MYZ6 492 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 B4DGG1 531 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 EIF3FO00303 357 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-226ENST00000547259 IFRD1O00458 451 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-226ENST00000547259 MAP2K7O14733 419 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 PRAMEF10O60809 474 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 RFPL1O75677 317 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 SLCO2B1O94956 709 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 WISP3O95389 354 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-226ENST00000547259 C2P06681 752 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 CCDC166P0CW27 439 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 MPC1LP0DKB6 136 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 PYGBP11216 843 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 HGFP14210 728 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 SLC2A4P14672 509 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 PDHA2P29803 388 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 GMPRP36959 345 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 IRF9Q00978 393 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 CSHL1Q14406 222 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 TGIF1Q15583 401 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 TMEM207Q6UWW9 146 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-226ENST00000547259 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 SRRM1Q8IYB3 904 aaKnown RBP11.74□□□□□ -0.53
HDAC7-226ENST00000547259 ACMSDQ8TDX5 336 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 EEF1AKMT1Q8WVE0 214 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 ANKRD49Q8WVL7 239 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 RMDN2Q96LZ7 410 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 C12orf66Q96MD2 445 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 FOPNLQ96NB1 174 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 CATSPER2Q96P56 530 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 SLC25A18Q9H1K4 315 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 OR52A5Q9H2C5 316 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 PRDM8Q9NQV8 689 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
HDAC7-226ENST00000547259 TBC1D29Q9UFV1 150 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 PCDHGA3Q9Y5H0 932 aa11.74□□□□□ -0.53
HDAC7-226ENST00000547259 AGPSO00116 658 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 SUV39H1O43463 412 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 LTA4HP09960 611 aaKnown RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 F3P13726 295 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 ITIH1P19827 911 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 CCNFP41002 786 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 RAB15P59190 212 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 SQSTM1Q13501 440 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 NR1D2Q14995 579 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 TBR1Q16650 682 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 SDK2Q58EX2 2172 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 AGAP9Q5VTM2 703 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 ABRAXAS1Q6UWZ7 409 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 NEK10Q6ZWH5 1172 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 ZNF438Q7Z4V0 828 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 C17orf82Q86X59 251 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 C4orf33Q8N1A6 199 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 AGBL5Q8NDL9 886 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 CFAP61Q8NHU2 1237 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 ZDHHC1Q8WTX9 485 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 KCTD4Q8WVF5 259 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 SMC6Q96SB8 1091 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms