RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SERPINB8P50452 374 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 EIF3IQ13347 325 aaKnown RBP19.81■□□□□ 0.76
HMGA2-211ENST00000545998 KIR2DS3Q14952 304 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 PHKG1Q16816 387 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 CACHD1Q5VU97 1274 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 SBSNQ6UWP8 590 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 MCOLN3Q8TDD5 553 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 OR2A14Q96R47 310 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 MAP3K3Q99759 626 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 CCDC77Q9BR77 488 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 ZNF768Q9H5H4 540 aaKnown RBP19.81■□□□□ 0.76
HMGA2-211ENST00000545998 LNPEPQ9UIQ6 1025 aa19.81■□□□□ 0.76
HMGA2-211ENST00000545998 SLC16A8O95907 504 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 SYF2O95926 243 aaKnown RBP19.8■□□□□ 0.76
HMGA2-211ENST00000545998 UGT2B7P16662 529 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 GMPRP36959 345 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 HSD17B2P37059 387 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 ARHGAP19Q14CB8 494 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 PPP1R3AQ16821 1122 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 SPESP1Q6UW49 350 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 RAB11FIP2Q7L804 512 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 CCDC91Q7Z6B0 441 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 CARFQ8N187 725 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 SPATA6LQ8N4H0 392 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 C2orf73Q8N5S3 287 aaPredicted RBP19.8■□□□□ 0.76
HMGA2-211ENST00000545998 WDR36Q8NI36 951 aaKnown RBP19.8■□□□□ 0.76
HMGA2-211ENST00000545998 KLHL6Q8WZ60 621 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 PPM1MQ96MI6 270 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 CMKLR1Q99788 373 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 PITPNM3Q9BZ71 974 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 NRSN2Q9GZP1 204 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 NOVA2Q9UNW9 492 aaKnown RBP19.8■□□□□ 0.76
HMGA2-211ENST00000545998 SATB2Q9UPW6 733 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 DMXL2Q8TDJ6 3036 aa19.8■□□□□ 0.76
HMGA2-211ENST00000545998 IGHV5-51A0A0C4DH38 117 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 PMS2P1A4D2B8 440 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 NPEPPSL1A6NEC2 478 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 C2P06681 752 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 ENO2P09104 434 aaPredicted RBP19.79■□□□□ 0.76
HMGA2-211ENST00000545998 CD1DP15813 335 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 SLC26A3P40879 764 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 MAGEA12P43365 314 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 FASTKQ14296 549 aaKnown RBP19.79■□□□□ 0.76
HMGA2-211ENST00000545998 C3orf38Q5JPI3 329 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 AGBL5Q8NDL9 886 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 ZNF480Q8WV37 535 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 PRR11Q96HE9 360 aaPredicted RBP19.79■□□□□ 0.76
HMGA2-211ENST00000545998 CCDC138Q96M89 665 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 CTNNAL1Q9UBT7 734 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 LOXL2Q9Y4K0 774 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 LAMA5O15230 3695 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 ZFHX4Q86UP3 3567 aa19.79■□□□□ 0.76
HMGA2-211ENST00000545998 TRABD2BA6NFA1 517 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 TRIM49D1C9J1S8 452 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 AGRPO00253 132 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 PLD2O14939 933 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 PRICKLE3O43900 615 aaPredicted RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 KRT37O76014 449 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 MPOP05164 745 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 SNRPAP09012 282 aaKnown RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 IMPA1P29218 277 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 TYK2P29597 1187 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 CSTF2P33240 577 aaKnown RBP eCLIP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 LSSP48449 732 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 SEPHS1P49903 392 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 PNLIPRP1P54315 467 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 ATP6V0D1P61421 351 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 DLG1Q12959 904 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 CSHL1Q14406 222 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 TSNQ15631 228 aaKnown RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 MBOAT1Q6ZNC8 495 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 TBC1D1Q86TI0 1168 aaPredicted RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 TAX1BP1Q86VP1 789 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 FBXO39Q8N4B4 442 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 MREGQ8N565 214 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 SLC22A18Q96BI1 424 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 SLC41A2Q96JW4 573 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 UNKQ9C0B0 810 aaKnown RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 POLR1BQ9H9Y6 1135 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 C1GALT1Q9NS00 363 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 AKAP7Q9P0M2 348 aaPredicted RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 PSMC3IPQ9P2W1 217 aaPredicted RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 TLK1Q9UKI8 766 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 ACOT9Q9Y305 439 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 PCDHGA8Q9Y5G5 932 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 A0A087X1B8 175 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 A0A096LPK6 155 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 A0A1W2PPV9 198 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 ZNF839A8K0R7 811 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 ISM1B1AKI9 464 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 HIST1H2AGP0C0S8 130 aaPredicted RBP19.78■□□□□ 0.76
HMGA2-211ENST00000545998 HGFP14210 728 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 HIST1H2ADP20671 130 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 CDH3P22223 829 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 AP1S2P56377 157 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 FOXK2Q01167 660 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 RTP5Q14D33 572 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 SLC5A12Q1EHB4 618 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 LGSNQ5TDP6 509 aa19.78■□□□□ 0.76
HMGA2-211ENST00000545998 FBXO38Q6PIJ6 1188 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms