RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 DNAJB7Q7Z6W7 309 aaPredicted RBP22.7■■□□□ 1.22
FOXA1-202ENST00000545425 OR10A6Q8NH74 314 aa22.7■■□□□ 1.22
FOXA1-202ENST00000545425 FNDC8Q8TC99 324 aa22.7■■□□□ 1.22
FOXA1-202ENST00000545425 CMTM7Q96FZ5 175 aa22.7■■□□□ 1.22
FOXA1-202ENST00000545425 GPN2Q9H9Y4 310 aaPredicted RBP22.7■■□□□ 1.22
FOXA1-202ENST00000545425 HCSTQ9UBK5 93 aa22.7■■□□□ 1.22
FOXA1-202ENST00000545425 ORC6Q9Y5N6 252 aa22.7■■□□□ 1.22
FOXA1-202ENST00000545425 PABPN1LA6NDY0 278 aaKnown RBP22.69■■□□□ 1.22
FOXA1-202ENST00000545425 LOC730098B7Z3J9 87 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 FOSL2P15408 326 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 PFKLP17858 780 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 CHRNA6Q15825 494 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 ZNF829Q3KNS6 432 aaPredicted RBP22.69■■□□□ 1.22
FOXA1-202ENST00000545425 PYCR3Q53H96 274 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 SPANXN4Q5MJ08 99 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 PGBD3Q8N328 593 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 PAF1Q8N7H5 531 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 LKAAEAR1Q8TD35 194 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 MYLIPQ8WY64 445 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 WBP2Q969T9 261 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 REXO5Q96IC2 774 aaKnown RBP22.69■■□□□ 1.22
FOXA1-202ENST00000545425 METTL2AQ96IZ6 378 aaKnown RBP22.69■■□□□ 1.22
FOXA1-202ENST00000545425 CPPED1Q9BRF8 314 aaPredicted RBP22.69■■□□□ 1.22
FOXA1-202ENST00000545425 BOCQ9BWV1 1114 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 FAM118AQ9NWS6 357 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 GALNT8Q9NY28 637 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 EVLQ9UI08 416 aaPredicted RBP22.69■■□□□ 1.22
FOXA1-202ENST00000545425 PRSS21Q9Y6M0 314 aa22.69■■□□□ 1.22
FOXA1-202ENST00000545425 IGLV3-16A0A075B6K0 115 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 GNGT2O14610 69 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CA3P07451 260 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 OR56A5P0C7T3 313 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 RPL17P18621 184 aaKnown RBP22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CRHBPP24387 322 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 S100A3P33764 101 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 SNRPD1P62314 119 aaKnown RBP22.68■■□□□ 1.22
FOXA1-202ENST00000545425 PTGR1Q14914 329 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 NEK10Q6ZWH5 1172 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 USP45Q70EL2 814 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 L3MBTL4Q8NA19 623 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 COPS8Q99627 209 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 RAD9AQ99638 391 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 SLC12A9Q9BXP2 914 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 PAIP1Q9H074 479 aaKnown RBP22.68■■□□□ 1.22
FOXA1-202ENST00000545425 PIF1Q9H611 641 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 PARVBQ9HBI1 364 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 TBC1D23Q9NUY8 699 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CDC14AQ9UNH5 594 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 MAPRE3Q9UPY8 281 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 HSPE1-MOB4S4R3N1 261 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CROCCQ5TZA2 2017 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 NUAK1O60285 661 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CREG1O75629 220 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CLIC3O95833 236 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 BCKDHAP12694 445 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 CCNA2P20248 432 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 GBX1Q14549 363 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 GPR107Q5VW38 600 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.68■■□□□ 1.22
FOXA1-202ENST00000545425 LINC00299Q6ZSB3 139 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 HTR3DQ70Z44 454 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 MSRB3Q8IXL7 192 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 OR2AP1Q8NGE2 309 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 FIBINQ8TAL6 211 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 STARD8Q92502 1023 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 FAM120BQ96EK7 910 aaKnown RBP22.68■■□□□ 1.22
FOXA1-202ENST00000545425 TOR3AQ9H497 397 aa22.68■■□□□ 1.22
FOXA1-202ENST00000545425 SLC16A6O15403 523 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 UGDHO60701 494 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 PFDN1O60925 122 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 CLDN7O95471 211 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 HIST1H2AGP0C0S8 130 aaPredicted RBP22.67■■□□□ 1.22
FOXA1-202ENST00000545425 HIST1H2ADP20671 130 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 EEF1B2P24534 225 aaKnown RBP22.67■■□□□ 1.22
FOXA1-202ENST00000545425 RYKP34925 604 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 TRPC1P48995 793 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 TPD52P55327 224 aaPredicted RBP22.67■■□□□ 1.22
FOXA1-202ENST00000545425 AP1S2P56377 157 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 MOGQ16653 247 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 MIPOL1Q8TD10 442 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 CSGALNACT1Q8TDX6 532 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 ZNF566Q969W8 418 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 SCRN2Q96FV2 425 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 HIST1H2AHQ96KK5 128 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 GAS2L1Q99501 681 aaPredicted RBP22.67■■□□□ 1.22
FOXA1-202ENST00000545425 HIST1H2AJQ99878 128 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 H2AFJQ9BTM1 129 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 VN1R3Q9BXE9 311 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 TM6SF2Q9BZW4 377 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 GABARAPL1Q9H0R8 117 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 LIN28AQ9H9Z2 209 aaKnown RBP22.67■■□□□ 1.22
FOXA1-202ENST00000545425 PREBQ9HCU5 417 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 SLC25A37Q9NYZ2 338 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 SAMD4AQ9UPU9 718 aaKnown RBP22.67■■□□□ 1.22
FOXA1-202ENST00000545425 ERVW-1Q9UQF0 538 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 V9GYQ6 96 aa22.67■■□□□ 1.22
FOXA1-202ENST00000545425 PRRG1O14668 218 aa22.66■■□□□ 1.22
FOXA1-202ENST00000545425 PER2O15055 1255 aa22.66■■□□□ 1.22
FOXA1-202ENST00000545425 MRPS14O60783 128 aaKnown RBP22.66■■□□□ 1.22
FOXA1-202ENST00000545425 MT-ND1P03886 318 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms