RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CDHR3Q6ZTQ4 885 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 CNTN4Q8IWV2 1026 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 GPR135Q8IZ08 494 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 C2orf73Q8N5S3 287 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 LINC01555Q8NAE3 123 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 FLVCR1-AS1Q8TAF5 88 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 WBP1Q96G27 269 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 C16orf45Q96MC5 204 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 IL17FQ96PD4 163 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 GPR21Q99679 349 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 AARSD1Q9BTE6 412 aaKnown RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 SLC7A5P2Q9GIP4 190 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 TWSG1Q9GZX9 223 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 CHRNA10Q9GZZ6 450 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 LHX9Q9NQ69 397 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 INTS7Q9NVH2 962 aaKnown RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 WHRNQ9P202 907 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 TRMT6Q9UJA5 497 aaKnown RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 KCND3Q9UK17 655 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 DHRS7Q9Y394 339 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 UTP11Q9Y3A2 253 aaKnown RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 PCDHB3Q9Y5E6 796 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 RAD51CO43502 376 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 FKBP9O95302 570 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 KLK3P07288 261 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-216ENST00000544996 CBSLP0DN79 551 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 CYP2A7P20853 494 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 PEBP1P30086 187 aaKnown RBP15.17■□□□□ 0.02
CCDC78-216ENST00000544996 CBSP35520 551 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 SKIV2L2P42285 1042 aaKnown RBP15.17■□□□□ 0.02
CCDC78-216ENST00000544996 MRPS25P82663 173 aaKnown RBP15.17■□□□□ 0.02
CCDC78-216ENST00000544996 CKAP4Q07065 602 aaKnown RBP15.17■□□□□ 0.02
CCDC78-216ENST00000544996 GALNT7Q86SF2 657 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 TAX1BP1Q86VP1 789 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 ANKMY2Q8IV38 441 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 OR1L3Q8NH93 324 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 HMGCLL1Q8TB92 370 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 TTC9Q92623 222 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 ARHGAP9Q9BRR9 750 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 SLC12A9Q9BXP2 914 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 RAB17Q9H0T7 212 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 DPH5Q9H2P9 285 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 TAS2R13Q9NYV9 303 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 SPATA7Q9P0W8 599 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 CROTQ9UKG9 612 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
CCDC78-216ENST00000544996 NBEAQ8NFP9 2946 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 E7EQ34 232 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 EIF3FO00303 357 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-216ENST00000544996 TP73O15350 636 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 PSIP1O75475 530 aaKnown RBP15.16■□□□□ 0.02
CCDC78-216ENST00000544996 MPC1LP0DKB6 136 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 TCN2P20062 427 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 ITGA1P56199 1179 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 CYP4F2P78329 520 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 CUL1Q13616 776 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 FRG1Q14331 258 aaKnown RBP15.16■□□□□ 0.02
CCDC78-216ENST00000544996 CCSMST1Q4G0I0 132 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 TEDDM1Q5T9Z0 273 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 STEAP4Q687X5 459 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 LRRC8EQ6NSJ5 796 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 FBXO36Q8NEA4 188 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 OR9A1PQ8NGU1 263 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 GIMAP7Q8NHV1 300 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 STARD8Q92502 1023 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 SLC39A7Q92504 469 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 MR1Q95460 341 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 CLIP3Q96DZ5 547 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 CATSPER2Q96P56 530 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 BBC3Q96PG8 261 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-216ENST00000544996 NDNQ99608 321 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 SLC30A3Q99726 388 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 ACTR5Q9H9F9 607 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-216ENST00000544996 FAM60AQ9NP50 221 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 IL17BQ9UHF5 180 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 CDC23Q9UJX2 597 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 ZFYVE26Q68DK2 2539 aa15.16■□□□□ 0.02
CCDC78-216ENST00000544996 ZNF839A8K0R7 811 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 ARHGEF33A8MVX0 844 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 C21orf140B9A014 251 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 E7ESA3 106 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 ZBTB14O43829 449 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 KATNA1O75449 491 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 OR2B3O76000 313 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 URI1O94763 535 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-216ENST00000544996 AHSGP02765 367 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 HBQ1P09105 142 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 MAGP20916 626 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
CCDC78-216ENST00000544996 HSD17B2P37059 387 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 RGS4P49798 205 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 CAV1Q03135 178 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 ARHGAP19Q14CB8 494 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 ZIC1Q15915 447 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 CYP2A13Q16696 494 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 TRMT10BQ6PF06 316 aaKnown RBP15.15■□□□□ 0.02
CCDC78-216ENST00000544996 ZNF572Q7Z3I7 529 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-216ENST00000544996 CPNE9Q8IYJ1 553 aa15.15■□□□□ 0.02
CCDC78-216ENST00000544996 ZBED8Q8IZ13 594 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms