RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 JUNDP17535 347 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 CYP2A7P20853 494 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 PTPN4P29074 926 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 LIG3P49916 1009 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 BLKP51451 505 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 DUSP3P51452 185 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-217ENST00000543537 INHBCP55103 352 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TIAL1Q01085 375 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPS7A-217ENST00000543537 RALGDSQ12967 914 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TARDBPQ13148 414 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPS7A-217ENST00000543537 RPA4Q13156 261 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 IRF4Q15306 451 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 LRRC73Q5JTD7 316 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 C10orf62Q5T681 223 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-217ENST00000543537 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TMEM207Q6UWW9 146 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 RNF165Q6ZSG1 346 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 ZCCHC23Q6ZST2 131 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TSPAN33Q86UF1 283 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 FAM9CQ8IZT9 166 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 PDPRQ8NCN5 879 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 NXPE2Q96DL1 559 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 BOCQ9BWV1 1114 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 SLC12A9Q9BXP2 914 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 MYLK2Q9H1R3 596 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 COG4Q9H9E3 785 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TRIM39Q9HCM9 518 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TCF7L2Q9NQB0 619 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 CD274Q9NZQ7 290 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 SPASTQ9UBP0 616 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 PNMA8BQ9ULN7 279 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-217ENST00000543537 CLCA2Q9UQC9 943 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 MED16Q9Y2X0 877 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 TRAF6Q9Y4K3 522 aa11.21□□□□□ -0.61
COPS7A-217ENST00000543537 EME2A4GXA9 379 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 OR1I1O60431 355 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 NIPSNAP2O75323 286 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 GPC4O75487 556 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 CRCPO75575 148 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 UBOX5O94941 541 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 ESRRBO95718 433 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 TSPAN12O95859 305 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 OTCP00480 354 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 ENO1P06733 434 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 THRAP10827 490 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 UGT1A6P19224 532 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 UGT1A1P22309 533 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 UGT1A4P22310 534 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 MAP4P27816 1152 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 AOAHP28039 575 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 SERPINB3P29508 390 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 UGT1A3P35503 534 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 UGT1A5P35504 534 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 TRIM23P36406 574 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 IDH3AP50213 366 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 THOP1P52888 689 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 DAB2P98082 770 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 CYP4F3Q08477 520 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 ZNF460Q14592 562 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 TGFBIQ15582 683 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 PFKFB4Q16877 469 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 SMU1Q2TAY7 513 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 DNAL1Q4LDG9 190 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 BCL7AQ4VC05 210 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 CCDC157Q569K6 752 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 ZNF542PQ5EBM4 170 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 ADAMTSL4Q6UY14 1074 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 Q6ZVL8 140 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 HSD11B1LQ7Z5J1 315 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 PHACTR4Q8IZ21 702 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 CPSF7Q8N684 471 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 BEND7Q8N7W2 519 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 PTGR2Q8N8N7 351 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 SIDT2Q8NBJ9 832 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 FBXO15Q8NCQ5 510 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 EEF1AKMT1Q8WVE0 214 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 TMEM159Q96B96 161 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 NUS1Q96E22 293 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 RMDN2Q96LZ7 410 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 CCM2Q9BSQ5 444 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 WRAP53Q9BUR4 548 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 LRRC61Q9BV99 259 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 RIOK2Q9BVS4 552 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 ABCG8Q9H221 673 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 RMI1Q9H9A7 625 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 PARVBQ9HBI1 364 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 MRPL40Q9NQ50 206 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 APOBEC3BQ9UH17 382 aaKnown RBP11.2□□□□□ -0.62
COPS7A-217ENST00000543537 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 DGKBQ9Y6T7 804 aa11.2□□□□□ -0.62
COPS7A-217ENST00000543537 LRRK1Q38SD2 2015 aa11.19□□□□□ -0.62
COPS7A-217ENST00000543537 FCHO1O14526 889 aa11.19□□□□□ -0.62
COPS7A-217ENST00000543537 FFAR2O15552 330 aa11.19□□□□□ -0.62
COPS7A-217ENST00000543537 ITM2AO43736 263 aa11.19□□□□□ -0.62
COPS7A-217ENST00000543537 SLCO2B1O94956 709 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms