RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 SUSD1Q6UWL2 747 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 GDPD3Q7L5L3 318 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 TSPYL5Q86VY4 417 aaPredicted RBP23.17■■□□□ 1.3
SHD-201ENST00000543264 CALHM3Q86XJ0 350 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 MIB1Q86YT6 1006 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 CCDC71Q8IV32 467 aaPredicted RBP23.17■■□□□ 1.3
SHD-201ENST00000543264 CELF2-AS1Q8N7Q2 184 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 ATG16L2Q8NAA4 619 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 ELMO1Q92556 727 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 EXOC2Q96KP1 924 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 TRIB3Q96RU7 358 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 PARVBQ9HBI1 364 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 QPCTLQ9NXS2 382 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 KIF17Q9P2E2 1029 aa23.17■■□□□ 1.3
SHD-201ENST00000543264 NUP214P35658 2090 aaPredicted RBP23.17■■□□□ 1.3
SHD-201ENST00000543264 C2orf81A6NN90 581 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 RPL9P32969 192 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 S100A5P33763 92 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 CREMQ03060 361 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 PNCKQ6P2M8 343 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 GLB1L3Q8NCI6 653 aaPredicted RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 REXO4Q9GZR2 422 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 NSUN3Q9H649 340 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 AGO1Q9UL18 857 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 ERVW-1Q9UQF0 538 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 RNF6Q9Y252 685 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 TNPO3Q9Y5L0 923 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 A0A0U1RQS6 177 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 AREL1O15033 823 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 PCDHGA12O60330 932 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 WBP4O75554 376 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 B3GALT4O96024 378 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 UGT2B10P36537 528 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 GDF5P43026 501 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 PSEN2P49810 448 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 GZMMP51124 257 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 AGMOQ6ZNB7 445 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 GALNT10Q86SR1 603 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 LILRB4Q8NHJ6 448 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 PDLIM5Q96HC4 596 aaKnown RBP23.16■■□□□ 1.3
SHD-201ENST00000543264 INPP5KQ9BT40 448 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 GABARAPL1Q9H0R8 117 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 CLMPQ9H6B4 373 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 KRT84Q9NSB2 600 aa23.16■■□□□ 1.3
SHD-201ENST00000543264 A0A096LPI6 279 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 TRBV5-3A0A0A0MS03 114 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 LOC100506127A0A0U1RQW1 187 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 RGS13O14921 159 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 PRAMEF11O60813 436 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 C21orf33P30042 268 aaPredicted RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 GNPDA1P46926 289 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 CLPPQ16740 277 aaPredicted RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 UBE2UQ5VVX9 321 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 MTFMTQ96DP5 389 aaKnown RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 B3GALT6Q96L58 329 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 TINF2Q9BSI4 451 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 RNF167Q9H6Y7 350 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 ST3GAL5Q9UNP4 418 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 GPR39O43194 453 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 IDH3BO43837 385 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 IL1RNP18510 177 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 MAGEA2P43356 314 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 TTPAP49638 278 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 RPP38P78345 283 aaKnown RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 MAD2L1Q13257 205 aaPredicted RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 PTPRRQ15256 657 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 PARP15Q460N3 678 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 SOWAHCQ53LP3 525 aaPredicted RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 KIAA1614Q5VZ46 1190 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 THEM5Q8N1Q8 247 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 AMER2Q8N7J2 671 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 PSD4Q8NDX1 1056 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 IPCEF1Q8WWN9 437 aaPredicted RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 DNASE1L2Q92874 299 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 MYEOVQ96EZ4 313 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 CPPED1Q9BRF8 314 aaPredicted RBP23.15■■□□□ 1.3
SHD-201ENST00000543264 AMBNQ9NP70 447 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 AP3M1Q9Y2T2 418 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 ANGPTL3Q9Y5C1 460 aa23.15■■□□□ 1.3
SHD-201ENST00000543264 M0R082 166 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 DSCR3O14972 297 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 BMP1P13497 986 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 EFNA1P20827 205 aaPredicted RBP23.14■■□□□ 1.3
SHD-201ENST00000543264 CTSKP43235 329 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 TAF1AQ15573 450 aaPredicted RBP23.14■■□□□ 1.3
SHD-201ENST00000543264 HORMAD1Q86X24 394 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 CDADC1Q9BWV3 514 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 TM9SF3Q9HD45 589 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 ABI2Q9NYB9 513 aaPredicted RBP23.14■■□□□ 1.3
SHD-201ENST00000543264 ZNF490Q9ULM2 529 aaPredicted RBP23.14■■□□□ 1.3
SHD-201ENST00000543264 VPS9D1Q9Y2B5 631 aa23.14■■□□□ 1.3
SHD-201ENST00000543264 IGLV3-10A0A075B6K4 115 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 HAT1O14929 419 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 DNTTP04053 509 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 DNAJA1P31689 397 aaKnown RBP23.14■■□□□ 1.29
SHD-201ENST00000543264 DDR2Q16832 855 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 PROX2Q3B8N5 592 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 USP43Q70EL4 1123 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 MON1AQ86VX9 555 aa23.14■■□□□ 1.29
SHD-201ENST00000543264 PLPP6Q8IY26 295 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms