RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DEFB103AP81534 67 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 AAK1Q2M2I8 961 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 CCNYL2Q5T2Q4 361 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 TMEM164Q5U3C3 297 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 LILRA6Q6PI73 481 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 MBOAT1Q6ZNC8 495 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 GPR149Q86SP6 731 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 CALHM3Q86XJ0 350 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 MICU2Q8IYU8 434 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 CMTM8Q8IZV2 173 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 ELMOD1Q8N336 334 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 SVOPLQ8N434 492 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 TERB1Q8NA31 727 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 OR10A6Q8NH74 314 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF420Q8TAQ5 688 aaPredicted RBP6.39□□□□□ -1.39
PTPRO-208ENST00000542557 SLC22A17Q8WUG5 538 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 TMBIM1Q969X1 311 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 TMIGD2Q96BF3 282 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 TESCQ96BS2 214 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 HIST1H2AHQ96KK5 128 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 FCRL1Q96LA6 429 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 OR52E6Q96RD3 313 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 UCN2Q96RP3 112 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 HIST1H2AJQ99878 128 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 H2AFJQ9BTM1 129 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 PAIP1Q9H074 479 aaKnown RBP6.39□□□□□ -1.39
PTPRO-208ENST00000542557 IKZF5Q9H5V7 419 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 KAT8Q9H7Z6 458 aaKnown RBP6.39□□□□□ -1.39
PTPRO-208ENST00000542557 RMND5AQ9H871 391 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 USE1Q9NZ43 259 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 PKD2L2Q9NZM6 624 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 B4GALT6Q9UBX8 382 aa6.39□□□□□ -1.39
PTPRO-208ENST00000542557 A0A1W2PRU2 124 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 PABPN1LA6NDY0 278 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 H0Y858 1186 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CXCR6O00574 342 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 UGDHO60701 494 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 AP2A2O94973 939 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 PDYNP01213 254 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 MT-ND1P03886 318 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 C8AP07357 584 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 THRBP10828 461 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 SOX11P35716 441 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 MTHFRP42898 656 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 MNX1P50219 401 aaPredicted RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 POLR2LP62875 67 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 KCNC3Q14003 757 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 DMC1Q14565 340 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CBX2Q14781 532 aaPredicted RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 MYBPC3Q14896 1274 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 TMEM214Q6NUQ4 689 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 BRAT1Q6PJG6 821 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 DHRS4L2Q6PKH6 230 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 TBPL2Q6SJ96 375 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 DPY19L3Q6ZPD9 716 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 KRTCAP2Q8N6L1 136 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 PJA1Q8NG27 643 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 NUDT8Q8WV74 236 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 SELENOMQ8WWX9 145 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 FIG4Q92562 907 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 SDCCAG3Q96C92 435 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 SLC47A1Q96FL8 570 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 ITCHQ96J02 903 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CNDP2Q96KP4 475 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 TUBA1CQ9BQE3 449 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 FAM83CQ9BQN1 747 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 THUMPD3Q9BV44 507 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 ELOVL6Q9H5J4 265 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 ZDHHC6Q9H6R6 413 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 BRD9Q9H8M2 597 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CARS2Q9HA77 564 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 SERHLQ9NQF3 203 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 ASAH2Q9NR71 780 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 TLR9Q9NR96 1032 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 DDX18Q9NVP1 670 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 ADGRE2Q9UHX3 823 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 TMPRSS11EQ9UL52 423 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 INVSQ9Y283 1065 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 V9GYQ6 96 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 TSPAN11A1L157 253 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 A6NJY4 79 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 C16orf96A6NNT2 1141 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 A8MX80 341 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CFAP99D6REC4 459 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 QSOX1O00391 747 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 WNT9AO14904 365 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 AREL1O15033 823 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 PRMT3O60678 531 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CPNE6O95741 557 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 UGT2B4P06133 528 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CYP2A6P11509 494 aaPredicted RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 ATP1B2P14415 290 aaPredicted RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 DDX6P26196 483 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 S100A3P33764 101 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 GZMMP51124 257 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 WDR5P61964 334 aaKnown RBP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 PPP2R2BQ00005 443 aa6.38□□□□□ -1.39
PTPRO-208ENST00000542557 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPRO-208ENST00000542557 DPY19L1Q2PZI1 675 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms