RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MTRRQ9UBK8 725 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 ADGRE2Q9UHX3 823 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 GNPTGQ9UJJ9 305 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 EIF3LQ9Y262 564 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 PKP3Q9Y446 797 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 PCDHGA8Q9Y5G5 932 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 MAGED1Q9Y5V3 778 aaPredicted RBP5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 BACE2Q9Y5Z0 518 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 PRSS21Q9Y6M0 314 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 V9GYQ6 96 aa5.08□□□□□ -1.6
ATPAF1-212ENST00000542495 KIAA1671Q9BY89 1806 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 hCG_2014768A0A024R1R8 64 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 A0A096LPI6 279 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 C16orf96A6NNT2 1141 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 SOBPA7XYQ1 873 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CXCR6O00574 342 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 GREM1O60565 184 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 TSPAN3O60637 253 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CBFA2T3O75081 653 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ERN1O75460 977 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 GMNNO75496 209 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PRKD3O94806 890 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PRAMEF1O95521 474 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PGRP06401 933 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PCNAP12004 261 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF12P17014 697 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ATF4P18848 351 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 EPORP19235 508 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 EN2P19622 333 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ITIH1P19827 911 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CCNA2P20248 432 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 DGKAP23743 735 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PRPH2P23942 346 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 NFKBIAP25963 317 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ACRV1P26436 265 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ACVR2AP27037 513 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 RYKP34925 604 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 GGT5P36269 586 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PIGAP37287 484 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 DCTP40126 519 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 MAGEA2P43356 314 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CSNK1DP48730 415 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 RGS4P49798 205 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ST13P50502 369 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 BMXP51813 675 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PRMT2P55345 433 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ISL1P61371 349 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PHC1P78364 1004 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CAP1Q01518 475 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 NFATC2Q13469 925 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 TOP3AQ13472 1001 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 IL18R1Q13478 541 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PON2Q15165 354 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 MAPKAPK3Q16644 382 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PHKG1Q16816 387 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 DPY19L1Q2PZI1 675 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CTU2Q2VPK5 515 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM174BQ3ZCQ3 159 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ANKDD1AQ495B1 522 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 HABP4Q5JVS0 413 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 SPANXN4Q5MJ08 99 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ARMC12Q5T9G4 340 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF691Q5VV52 312 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 EGFLAMQ63HQ2 1017 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PTRHD1Q6GMV3 140 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 SDE2Q6IQ49 451 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PRSS55Q6UWB4 352 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 SUSD1Q6UWL2 747 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 TREML4Q6UXN2 200 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 Q6ZVU0 165 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 C16orf59Q7L2K0 433 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 DET1Q7L5Y6 550 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 R3HCC1LQ7Z5L2 792 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 RNF180Q86T96 592 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF554Q86TJ5 538 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 RBM23Q86U06 439 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM217AQ8IXS0 508 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 MICU2Q8IYU8 434 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 RNF168Q8IYW5 571 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ABI1Q8IZP0 508 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CLEC4FQ8N1N0 589 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 CBARPQ8N350 705 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ZCCHC7Q8N3Z6 543 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 LIX1Q8N485 282 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ZBTB2Q8N680 514 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 OR10A6Q8NH74 314 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 OR5K1Q8NHB7 308 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 TRUB1Q8WWH5 349 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 FIG4Q92562 907 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 MUL1Q969V5 352 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF566Q969W8 418 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 VOPP1Q96AW1 172 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC47A1Q96FL8 570 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 TRMT2BQ96GJ1 504 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 PLEKHA8Q96JA3 519 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 GLT1D1Q96MS3 346 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM210AQ96ND0 272 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 HBEGFQ99075 208 aa5.07□□□□□ -1.6
ATPAF1-212ENST00000542495 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms