RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 CD1DP15813 335 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 HRH2P25021 359 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 GCAP28676 217 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 PKLRP30613 574 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 CCKBRP32239 447 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 CSHL1Q14406 222 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 CYP2A13Q16696 494 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 CDCP2Q5VXM1 449 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 DUS1LQ6P1R4 473 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 FBXO38Q6PIJ6 1188 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 CMC1Q7Z7K0 106 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 SLCO6A1Q86UG4 719 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 SFTPA2Q8IWL1 248 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 IQCKQ8N0W5 287 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 ALKBH8Q96BT7 664 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 TBC1D10AQ9BXI6 508 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 TMEM121BQ9BXQ6 578 aaPredicted RBP16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 VPS11Q9H270 941 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 ARL15Q9NXU5 204 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 A0A1W2PQM1 296 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 TLDC2A0PJX2 215 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 OR6C74A6NCV1 312 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 TLCD2A6NGC4 264 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 SYF2O95926 243 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 MT-CO3P00414 261 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 SHBGP04278 402 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 ANKRD34CP0C6C1 535 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 MYF5P13349 255 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 JUPP14923 745 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 INSM1Q01101 510 aaPredicted RBP16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 CCDC157Q569K6 752 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 UBAP2Q5T6F2 1119 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 METTL2BQ6P1Q9 378 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 TMEM207Q6UWW9 146 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 GPSM1Q86YR5 675 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 CAPS2Q9BXY5 557 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 SYNDIG1Q9H7V2 258 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 C1GALT1Q9NS00 363 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 TBK1Q9UHD2 729 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 RNF112Q9ULX5 631 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 ICKQ9UPZ9 632 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 PDE10AQ9Y233 779 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 PCDHB11Q9Y5F2 797 aa16.97■□□□□ 0.31
CLSTN3-210ENST00000540931 CAPN5O15484 640 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 KERAO60938 352 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 CHRM5P08912 532 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 OAS2P29728 719 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 PNLIPRP1P54315 467 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 INHBCP55103 352 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 ABATP80404 500 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 ZNF460Q14592 562 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 SLC5A12Q1EHB4 618 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 KRT71Q3SY84 523 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 SULT1C3Q6IMI6 304 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 SBSNQ6UWP8 590 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 DHRS13Q6UX07 377 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 TMPRSS7Q7RTY8 843 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 HDXQ7Z353 690 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 PRSS42Q7Z5A4 293 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 RAB44Q7Z6P3 723 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 SYTL1Q8IYJ3 562 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 DCBLD1Q8N8Z6 715 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 ANKRD49Q8WVL7 239 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 PKP4Q99569 1192 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 CMKLR1Q99788 373 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 MIPEPQ99797 713 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 MRPL57Q9BQC6 102 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 CHRNA10Q9GZZ6 450 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 ACBD3Q9H3P7 528 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 VIPAS39Q9H9C1 493 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 EURLQ9NYK6 297 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 NUDT4Q9NZJ9 180 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 MID2Q9UJV3 735 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 GRID1Q9ULK0 1009 aa16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 RUVBL2Q9Y230 463 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-210ENST00000540931 FASNP49327 2511 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 SPEGQ15772 3267 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 GSAPA4D1B5 854 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 RGS16O15492 202 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 GLRA3O75311 464 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 RFPL1O75677 317 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 SLC16A8O95907 504 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 TYRP1P17643 537 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 TFEBP19484 476 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 MLLT3P42568 568 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 BDKRB1P46663 353 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 SLCO1A2P46721 670 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 NAA20P61599 178 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 ZFP36L1Q07352 338 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 FOXC1Q12948 553 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 COL9A2Q14055 689 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 GRB7Q14451 532 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 TGFBIQ15582 683 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 PPP1R3AQ16821 1122 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 TMTC4Q5T4D3 741 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 HES3Q5TGS1 186 aa16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 CAPN13Q6MZZ7 669 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-210ENST00000540931 IRGCQ6NXR0 463 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms