RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 CDADC1Q9BWV3 514 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 ABCG8Q9H221 673 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 ARNT2Q9HBZ2 717 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 CTDSP2O14595 271 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 STX16O14662 325 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 TLL1O43897 1013 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 WDR47O94967 919 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 YES1P07947 543 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 PRKACBP22694 351 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 MADCAM1Q13477 382 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 ABRAXAS2Q15018 415 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 MED22Q15528 200 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 UBE2J2Q8N2K1 259 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 TMEM132CQ8N3T6 1108 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 OR4F6Q8NGB9 312 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 HEBP1Q9NRV9 189 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
SFSWAP-209ENST00000540469 EFCAB10A6NFE3 127 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 SOCS7O14512 581 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 TEX28O15482 410 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 HNF4AP41235 474 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 HTR2BP41595 481 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 C18orf21Q32NC0 220 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 CAPN13Q6MZZ7 669 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 TSPYL5Q86VY4 417 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 EEF1AKMT1Q8WVE0 214 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 DNASE1L2Q92874 299 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 OMA1Q96E52 524 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 KCNC2Q96PR1 638 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 ACTL8Q9H568 366 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 SAMD4AQ9UPU9 718 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 IRAK2O43187 625 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 RGS14O43566 566 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 WISP3O95389 354 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 RETP07949 1114 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 IFI30P13284 250 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 CA5AP35218 305 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 INO80DQ53TQ3 878 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 BRMS1LQ5PSV4 323 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 SIGIRRQ6IA17 410 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 GPR149Q86SP6 731 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 UBQLNLQ8IYU4 475 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 PAF1Q8N7H5 531 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 CDC26Q8NHZ8 85 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 ZNF675Q8TD23 568 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 MYLPFQ96A32 169 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 POPDC3Q9HBV1 291 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 DYRK4Q9NR20 520 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 FBXL12Q9NXK8 326 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 QPCTLQ9NXS2 382 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 HSPE1-MOB4S4R3N1 261 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 MROH6A6NGR9 719 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 TMCC2O75069 709 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 GJB3O75712 270 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 DDNO94850 711 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 KRT6AP02538 564 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 KRT6BP04259 564 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 SERPINF2P08697 491 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 HAPLN1P10915 354 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 DNAJA1P31689 397 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 UGT2B10P36537 528 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 IL12RB1P42701 662 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 LHX1P48742 406 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 GBX1Q14549 363 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 PROX2Q3B8N5 592 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 GALNT7Q86SF2 657 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 BPHLQ86WA6 291 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 BEND7Q8N7W2 519 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 TP53INP1Q96A56 240 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 MED30Q96HR3 178 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 ZNF382Q96SR6 550 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 MAGIXQ9H6Y5 334 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 IPPKQ9H8X2 491 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 IMPAD1Q9NX62 359 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
SFSWAP-209ENST00000540469 PCDHGA12O60330 932 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 FABP3P05413 133 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 COL1A2P08123 1366 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 FPR1P21462 350 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 S100A3P33764 101 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 CHRNEQ04844 493 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 ARHGAP1Q07960 439 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 TRIM48Q8IWZ4 208 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 KLHDC8BQ8IXV7 354 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 SIMC1Q8NDZ2 872 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 OR4K2Q8NGD2 314 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 CDKN2AIPNLQ96HQ2 116 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
SFSWAP-209ENST00000540469 SLC25A37Q9NYZ2 338 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms