RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SMARCD2Q92925 531 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CSF3RQ99062 836 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 TRIM54Q9BYV2 358 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 FBXO8Q9NRD0 319 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CLEC1BQ9P126 229 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 TRMT6Q9UJA5 497 aaKnown RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 HSPB11Q9Y547 144 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 RBBP6Q7Z6E9 1792 aaKnown RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 A0A087X1B8 175 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 AGAP5A6NIR3 686 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 ENDOD1O94919 500 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 NAT2P11245 290 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 NFKB1P19838 968 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 M6PRP20645 277 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 AGXTP21549 392 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 IFITM3Q01628 133 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 RAD51Q06609 339 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 SOWAHAQ2M3V2 549 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ADPRMQ3LIE5 342 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 PXDC1Q5TGL8 231 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 PNCKQ6P2M8 343 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 PLET1Q6UQ28 207 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 GALNT7Q86SF2 657 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 LINC01465Q8N7H1 131 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 STYXQ8WUJ0 223 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 MUL1Q969V5 352 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 MAP6Q96JE9 813 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CHCHD6Q9BRQ6 235 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 TMPRSS4Q9NRS4 437 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 POLR3BQ9NW08 1133 aaPredicted RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 FAM118AQ9NWS6 357 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ERVK-18Q9QC07 812 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 GRIP1Q9Y3R0 1128 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 GREB1LQ9C091 1923 aaPredicted RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 TBC1D3BA6NDS4 549 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 SLC38A8A6NNN8 435 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 H3BMM5 538 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 POLR1CO15160 346 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 DCNP07585 359 aaKnown RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 USP17L7P0C7H9 530 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 HSD17B1P14061 328 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 POLR2CP19387 275 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 CD72P21854 359 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TIE1P35590 1138 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 NUMBP49757 651 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ZNF135P52742 658 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 CDH17Q12864 832 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TEAD2Q15562 447 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 FXNQ16595 210 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 LPAL2Q16609 132 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 C9orf57Q5W0N0 161 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TRIM48Q8IWZ4 208 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 C19orf18Q8NEA5 215 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 OR9Q1Q8NGQ5 310 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 BPIFB1Q8TDL5 484 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 GPR152Q8TDT2 470 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 RTP4Q96DX8 246 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 CD300AQ9UGN4 299 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PIAS3Q9Y6X2 628 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PRR23AA6NEV1 266 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PLD2O14939 933 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ACOX3O15254 700 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 SCO2O43819 266 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 GABARAPO95166 117 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 CHRM3P20309 590 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 LILRA4P59901 499 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 MVKQ03426 396 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 SCN1BQ07699 218 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 CLCA4Q14CN2 919 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TIMM50Q3ZCQ8 353 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 KIAA0319Q5VV43 1072 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 FAM122CQ6P4D5 195 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 CNSTQ6PJW8 725 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PHC2Q8IXK0 858 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 OR8H3Q8N146 312 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 CAMKK1Q8N5S9 505 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 FAM83FQ8NEG4 500 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 CNIH3Q8TBE1 160 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 FAM110BQ8TC76 370 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 FAM3CQ92520 227 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 DUS3LQ96G46 650 aaKnown RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 MSANTD3Q96H12 275 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PPM1MQ96MI6 270 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 RDH12Q96NR8 316 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TBCDQ9BTW9 1192 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 TRMOQ9BU70 441 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 SNX7Q9UNH6 387 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 BTRCQ9Y297 605 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 DERAQ9Y315 318 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 HAT1O14929 419 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 KCNE1P15382 129 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 IGFBP5P24593 272 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 LTBRP36941 435 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 MATKP42679 507 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 AKR1D1P51857 326 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms