RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GALNT16Q8N428 558 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 LINC01555Q8NAE3 123 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 CLEC1AQ8NC01 280 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 OR4L1Q8NH43 312 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 SSC4DQ8WTU2 575 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 FER1L6-AS2Q96M78 137 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 TTC1Q99614 292 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 SLC29A3Q9BZD2 475 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 IRAK4Q9NWZ3 460 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 P4HTMQ9NXG6 502 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 CRYBG3Q68DQ2 2970 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 SHANK1Q9Y566 2161 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 FER1L5A0AVI2 2057 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 E7EVH7 732 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 F8W8V4 182 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 PEX12O00623 359 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 GPC4O75487 556 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 IFNB1P01574 187 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 IGHEP01854 428 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 UMODP07911 640 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 SPTBP11277 2137 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 ITGAXP20702 1163 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 VARSP26640 1264 aaKnown RBP12.03□□□□□ -0.48
VAMP1-206ENST00000538970 HSPA14Q0VDF9 509 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 MRPL49Q13405 166 aaKnown RBP12.03□□□□□ -0.48
VAMP1-206ENST00000538970 MYBPC3Q14896 1274 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 NLRP9Q7RTR0 991 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 DCUN1D3Q8IWE4 304 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 PEX13Q92968 403 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 PTERQ96BW5 349 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 C19orf60Q96EN9 201 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 NDC1Q9BTX1 674 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 CARD6Q9BX69 1037 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 TSSK1BQ9BXA7 367 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 FRMD8P1Q9BZ68 369 aaPredicted RBP12.03□□□□□ -0.48
VAMP1-206ENST00000538970 CASS4Q9NQ75 786 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 SLC22A11Q9NSA0 550 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 CUEDC1Q9NWM3 386 aaPredicted RBP12.03□□□□□ -0.48
VAMP1-206ENST00000538970 EURLQ9NYK6 297 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 CIDEBQ9UHD4 219 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 KLHL20Q9Y2M5 609 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 TCAF1Q9Y4C2 921 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 CACNA1DQ01668 2161 aa12.03□□□□□ -0.48
VAMP1-206ENST00000538970 CENPEQ02224 2701 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 IQCF5A8MTL0 148 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 MASP2O00187 686 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 KRT86O43790 486 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 RPN2P04844 631 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 ALPPP05187 535 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 CD9P21926 228 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 SOX8P57073 446 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 PRAMEP78395 509 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 PLEKHN1Q494U1 663 aaPredicted RBP12.02□□□□□ -0.49
VAMP1-206ENST00000538970 FASTKD1Q53R41 847 aaKnown RBP12.02□□□□□ -0.49
VAMP1-206ENST00000538970 AARS2Q5JTZ9 985 aaKnown RBP12.02□□□□□ -0.49
VAMP1-206ENST00000538970 SEL1L2Q5TEA6 688 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 IGFL3Q6UXB1 125 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 PRUNE1Q86TP1 453 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 TAX1BP1Q86VP1 789 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 IQCKQ8N0W5 287 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 KRT222Q8N1A0 295 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 LMNTD1Q8N9Z9 388 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 OR6P1Q8NGX9 317 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 ASZ1Q8WWH4 475 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 DLG3Q92796 817 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 FKBP10Q96AY3 582 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 SNRNP40Q96DI7 357 aaKnown RBP12.02□□□□□ -0.49
VAMP1-206ENST00000538970 IL17FQ96PD4 163 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 ZNF552Q9H707 407 aaPredicted RBP12.02□□□□□ -0.49
VAMP1-206ENST00000538970 RAB6BQ9NRW1 208 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 MAP10Q9P2G4 905 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 ZNF148Q9UQR1 794 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 B3GNT3Q9Y2A9 372 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.49
VAMP1-206ENST00000538970 PRRC2CQ9Y520 2896 aaKnown RBP12.02□□□□□ -0.49
VAMP1-206ENST00000538970 A0A1B0GX78 115 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 AGPSO00116 658 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 RASGRF2O14827 1237 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 KLHL41O60662 606 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 SLCO2B1O94956 709 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 S1PR4O95977 384 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 APOA4P06727 396 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 ETS1P14921 441 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 AOAHP28039 575 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 TNFRSF8P28908 595 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 PPARGP37231 505 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 DCTP40126 519 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 ARSFP54793 590 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 TMED2Q15363 201 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 CYP2A13Q16696 494 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 EIF2S3LQ2VIR3 472 aaKnown RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 FCRL6Q6DN72 434 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 TTLL10Q6ZVT0 673 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 SLC13A5Q86YT5 568 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 MCATQ8IVS2 390 aaKnown RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 C2orf73Q8N5S3 287 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 PPHLN1Q8NEY8 458 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms