RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NEK2P51955 445 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 POLE2P56282 527 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CLDN8P56748 225 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 PFN3P60673 137 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 GSTM4Q03013 218 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CYP4F3Q08477 520 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 DHCR24Q15392 516 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 RUNDC3AQ59EK9 446 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 AADATQ8N5Z0 425 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 BTN2A2Q8WVV5 523 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 FBXL8Q96CD0 374 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 TIFAQ96CG3 184 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 LRIG1Q96JA1 1093 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 VPS35Q96QK1 796 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 HHIPQ96QV1 700 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 SEPHS2Q99611 448 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ADI1Q9BV57 179 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 RBM38Q9H0Z9 239 aaKnown RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ELOVL6Q9H5J4 265 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 GORASP2Q9H8Y8 452 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 SLC6A13Q9NSD5 602 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 C16orf96A6NNT2 1141 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 TLL1O43897 1013 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 TULP3O75386 442 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 LDLRP01130 860 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 MT-ND1P03886 318 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 CYP17A1P05093 508 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 ANXA6P08133 673 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 GNAO1P09471 354 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 PRPS2P11908 318 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 ITPKAP23677 461 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 NFKBIAP25963 317 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 CTSCP53634 463 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SLC36A3Q495N2 470 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 OR2T12Q8NG77 320 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 HCAR2Q8TDS4 363 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 OSCP1Q8WVF1 389 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 BADQ92934 168 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF707Q96C28 371 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 CMTM7Q96FZ5 175 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 OR52E6Q96RD3 313 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 GRIP2Q9C0E4 1043 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 ATG10Q9H0Y0 220 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SERHLQ9NQF3 203 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 MAN2B2Q9Y2E5 1009 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 V9GYQ6 96 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 EI24O14681 340 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SLC9A3R1O14745 358 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 PSIP1O75475 530 aaKnown RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 PRSS23O95084 383 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SRPRAP08240 638 aaKnown RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 HOXB9P17482 250 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SDC1P18827 310 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 MYF6P23409 242 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 TACR1P25103 407 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 MERTKQ12866 999 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 POM121L1PQ3SYA9 428 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 GTDC1Q4AE62 458 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 LRIF1Q5T3J3 769 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 THEMIS2Q5TEJ8 643 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SLC30A9Q6PML9 568 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 LIPIQ6XZB0 460 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 C12orf40Q86WS4 652 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF366Q8N895 744 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 RASGEF1AQ8N9B8 481 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 FAM47BQ8NA70 645 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 OR10A6Q8NH74 314 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 APIPQ96GX9 242 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 PAIP1Q9H074 479 aaKnown RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 NTN4Q9HB63 628 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 SLC8A2Q9UPR5 921 aa13.64□□□□□ -0.23
LIMK1-208ENST00000538333 TCF20Q9UGU0 1960 aaKnown RBP13.64□□□□□ -0.23
LIMK1-208ENST00000538333 PABPN1LA6NDY0 278 aaKnown RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 ARHGEF33A8MVX0 844 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 UPK1AO00322 258 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 QSOX1O00391 747 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 VILLO15195 856 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 TSPAN6O43657 245 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 JUPP14923 745 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 ACPPP15309 386 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 NELFEP18615 380 aaKnown RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 CD22P20273 847 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 DGKGP49619 791 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 NR1H2P55055 460 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 UBE3AQ05086 875 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 KCNC3Q14003 757 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF284Q2VY69 593 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 TCEAL5Q5H9L2 206 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms