RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SLCO1B3Q9NPD5 702 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SLC39A1Q9NY26 324 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 APOBEC2Q9Y235 224 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 MTORP42345 2549 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 THADAQ6YHU6 1953 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SCN2AQ99250 2005 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TMEM233B4DJY2 109 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 FAM227AF5H4B4 570 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 AREL1O15033 823 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ALOX12BO75342 701 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 F3P13726 295 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SERPINB9P50453 376 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 BTN3A2P78410 334 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 PEX6Q13608 980 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 GPR19Q15760 415 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TCHHL1Q5QJ38 904 aaPredicted RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 GRTP1Q5TC63 336 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ZDHHC24Q6UX98 284 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 C10orf107Q8IVU9 208 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 MFSD2AQ8NA29 543 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 OLIG1Q8TAK6 271 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 RDH11Q8TC12 318 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SLC13A3Q8WWT9 602 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 INPP5DQ92835 1189 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 YIPF4Q9BSR8 244 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 STRADBQ9C0K7 418 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 PARVBQ9HBI1 364 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 DSPP15924 2871 aaKnown RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 MPDZO75970 2070 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 A6NCN8 305 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 WNT1P04628 370 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 GSNP06396 782 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 TUBBP07437 444 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 CCL4P13236 92 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 CA5AP35218 305 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 LEPRP48357 1165 aaKnown RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 DUSP3P51452 185 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 OCA2Q04671 838 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 GAB4Q2WGN9 574 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 CATSPEREQ5SY80 951 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 GKAP1Q5VSY0 366 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 CYP20A1Q6UW02 462 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ANKRD46Q86W74 232 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 NCLNQ969V3 563 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 BBS4Q96RK4 519 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 FANCEQ9HB96 536 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ZNF71Q9NQZ8 489 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 FGFR1OP2Q9NVK5 253 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 NLE1Q9NVX2 485 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 BCAP29Q9UHQ4 241 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 STK38LQ9Y2H1 464 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ANK1P16157 1881 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 A0A0A6YYC8 382 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 I3L1I5 382 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 GALR2O43603 387 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 ZNF821O75541 412 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 EPOP01588 193 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 IGHV4-34P06331 123 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 PTNP21246 168 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 CMPK1P30085 196 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 STX5Q13190 355 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 TUBB3Q13509 450 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 FASTKQ14296 549 aaKnown RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 CLCA4Q14CN2 919 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 HES3Q5TGS1 186 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 VWA5B1Q5TIE3 1220 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 KIAA0930Q6ICG6 404 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 RAB11FIP2Q7L804 512 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ADGRG6Q86SQ4 1221 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 NKAPQ8N5F7 415 aaKnown RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 BCAS4Q8TDM0 211 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 SMPDL3BQ92485 455 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 OR8D2Q9GZM6 311 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 WDR55Q9H6Y2 383 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 PDFQ9HBH1 243 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 SYCE1LA8MT33 242 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 H3BMM5 538 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 PPP6CO00743 305 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 JRKO75564 520 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 CCNA2P20248 432 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 CD9P21926 228 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 FECHP22830 423 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 RYKP34925 604 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 SERPINB5P36952 375 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ID4P47928 161 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 RPL38P63173 70 aaKnown RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 FZD2Q14332 565 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 PRAMEF13Q5VWM6 474 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 PMS2CLQ68D20 193 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 USP30Q70CQ3 517 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ADAMTSL2Q86TH1 951 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 HM13Q8TCT9 377 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 METTL21AQ8WXB1 218 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 PEX11GQ96HA9 241 aa7.03□□□□□ -1.28
MSH6-209ENST00000538136 ZNF514Q96K75 400 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 SORBS1Q9BX66 1292 aaKnown RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 FRMD8Q9BZ67 464 aaPredicted RBP7.03□□□□□ -1.28
MSH6-209ENST00000538136 CNOT10Q9H9A5 744 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms