RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 DNAJA1P31689 397 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RHOAP61586 193 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 NFATC3Q12968 1075 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SETMARQ53H47 684 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PAPD4Q6PIY7 484 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZDHHC24Q6UX98 284 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 KCTD9Q7L273 389 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DPPA2Q7Z7J5 298 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PHF13Q86YI8 300 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DCUN1D3Q8IWE4 304 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LNX2Q8N448 690 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RAD51AP1Q96B01 352 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LURAP1Q96LR2 239 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LRRC3Q9BY71 257 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 COL20A1Q9P218 1284 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ADAMTS6Q9UKP5 1117 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TRPV2Q9Y5S1 764 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 C2orf92A0A1B0GVN3 265 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 AQP12BA6NM10 295 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 A8MX80 341 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LCMT2O60294 686 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DGKAP23743 735 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 POU4F2Q12837 409 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FAM151BQ6UXP7 276 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SYVN1Q86TM6 617 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 AQP12AQ8IXF9 295 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 Q8N9G6 341 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TERB2Q8NHR7 220 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CPT1BQ92523 772 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF354BQ96LW1 612 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FOLH1BQ9HBA9 442 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PRKCHP24723 683 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CDKN2BP42772 138 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PIGFQ07326 219 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LAMTOR4Q0VGL1 99 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ABRQ12979 859 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PMS2P3Q13401 168 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF311Q5JNZ3 666 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SMARCD3Q6STE5 483 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LGI2Q8N0V4 545 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GJD3Q8N144 294 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MED30Q96HR3 178 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PLA2G12BQ9BX93 195 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 B3GNT4Q9C0J1 378 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TUBGCP6Q96RT7 1819 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ALKQ9UM73 1620 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 A8MUA0 341 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF705FA8MVS1 300 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF705DP0CH99 300 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF705BP0CI00 300 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ECHS1P30084 290 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FAM214AQ32MH5 1076 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 AKR1C8PQ5T2L2 129 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 KIAA1161Q6NSJ0 714 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 KLHL6Q8WZ60 621 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CELF1Q92879 486 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ITPAQ9BY32 194 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SALL4Q9UJQ4 1053 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ASTN1O14525 1302 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CHRNA1P02708 482 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CATP04040 527 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MBL2P11226 248 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CHMP24386 653 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 NCS1P62166 190 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 HECTD2Q5U5R9 776 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR2T5Q6IEZ7 315 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CFAP77Q6ZQR2 320 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SLC16A9Q7RTY1 509 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DEFB106AQ8N104 65 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR2T29Q8NH02 315 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CLIP3Q96DZ5 547 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MAGEB10Q96LZ2 347 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RNF157Q96PX1 679 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MS4A12Q9NXJ0 267 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 VWA7Q9Y334 891 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MROH2AA6NES4 1674 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RGPD5Q99666 1765 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ARL5CA6NH57 179 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DLGAP1O14490 977 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RHOCP08134 193 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR56A5P0C7T3 313 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GNPDA1P46926 289 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ETV1P50549 477 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GK2Q14410 553 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 HGSNATQ68CP4 663 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF627Q7L945 461 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 IRF2BP1Q8IU81 584 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MMAAQ8IVH4 418 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 POGLUT1Q8NBL1 392 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TBC1D15Q8TC07 691 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RBM7Q9Y580 266 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SLIT1O75093 1534 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PAHP00439 452 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 EEFSECP57772 596 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 NKX6-1P78426 367 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MC2RQ01718 297 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ASTE1Q2TB18 679 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms