RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.513e-8■■■□□ 15.8
CPSF7-218ENST00000537641 RIBC2Q9H4K1 309 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 LRTM1Q9HBL6 345 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 ACOT13Q9NPJ3 140 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 TLR8Q9NR97 1041 aaKnown RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 EXD2Q9NVH0 621 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 ERVK-11Q9UQG0 969 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PKP3Q9Y446 797 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 GMPPBQ9Y5P6 360 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 A3GALT2U3KPV4 340 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PER2O15055 1255 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 STX7O15400 261 aaKnown RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 FAM20BO75063 409 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 UPK1BO75841 260 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 CCNDBP1O95273 360 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PRLP01236 227 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 EBLN1P0CF75 366 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 FPR1P21462 350 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PRKACGP22612 351 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 FMO3P31513 532 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 RGRP47804 291 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 RGS4P49798 205 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 VBP1P61758 197 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 TUBA1BP68363 451 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PHC1P78364 1004 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 SP3Q02447 781 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 MAD2L1BPQ15013 274 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 DDR2Q16832 855 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 AAK1Q2M2I8 961 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 TTLL9Q3SXZ7 439 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 USP39Q53GS9 565 aaKnown RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 SDHAF4Q5VUM1 108 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 TMEM236Q5W0B7 351 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 NADSYN1Q6IA69 706 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 OR2T5Q6IEZ7 315 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 MSANTD1Q6ZTZ1 278 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 TUBA1AQ71U36 451 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 SNX20Q7Z614 316 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PLD3Q8IV08 490 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 LPCAT1Q8NF37 534 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 OR2T29Q8NH02 315 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 NETO1Q8TDF5 533 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 ITCHQ96J02 903 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 OR52E6Q96RD3 313 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 SIGLEC11Q96RL6 698 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 HBEGFQ99075 208 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PITX2Q99697 317 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 CTRCQ99895 268 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 TSEN34Q9BSV6 310 aaKnown RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 ADGRE3Q9BY15 652 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 FAM126AQ9BYI3 521 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 TMEM161AQ9NX61 479 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 VNN3Q9NY84 501 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 EVLQ9UI08 416 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 ZNF229Q9UJW7 825 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 PRG3Q9Y2Y8 225 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-218ENST00000537641 UGT2A1Q9Y4X1 527 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 ANGPTL3Q9Y5C1 460 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 CENPFP49454 3210 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 ANKRD12Q6UB98 2062 aa11.87□□□□□ -0.51
CPSF7-218ENST00000537641 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-218ENST00000537641 OR2A25A4D2G3 310 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 OR6C75A6NL08 312 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 AREL1O15033 823 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 KDELR3O43731 214 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 MITFO75030 526 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-218ENST00000537641 GSNP06396 782 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 S100A1P23297 94 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 RPS3P23396 243 aaKnown RBP eCLIP11.86□□□□□ -0.51
CPSF7-218ENST00000537641 DNAJA1P31689 397 aaKnown RBP11.86□□□□□ -0.51
CPSF7-218ENST00000537641 GRK4P32298 578 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 TGFBR2P37173 567 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 GSSP48637 474 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
CPSF7-218ENST00000537641 GPR15P49685 360 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 DAPP51397 102 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 NCS1P62166 190 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CSNK2BP67870 215 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CACNG1Q06432 222 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 DNASE1L3Q13609 305 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 KCNJ8Q15842 424 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 PGS1Q32NB8 556 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 GTDC1Q4AE62 458 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CTXN3Q4LDR2 81 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 C10orf120Q5SQS8 335 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 UBE2UQ5VVX9 321 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 LAIR1Q6GTX8 287 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CES5AQ6NT32 575 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CERS6Q6ZMG9 384 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CCDC81Q6ZN84 652 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 GCNT7Q6ZNI0 430 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 CYP4Z1Q86W10 505 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 MIB1Q86YT6 1006 aa11.86□□□□□ -0.51
CPSF7-218ENST00000537641 OR7D4Q8NG98 312 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms