RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MED8Q96G25 268 aa15.19■□□□□ 0.02
SFSWAP-206ENST00000537582 LOXL4Q96JB6 756 aa15.19■□□□□ 0.02
SFSWAP-206ENST00000537582 MVB12BQ9H7P6 319 aa15.19■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC40A1Q9NP59 571 aa15.19■□□□□ 0.02
SFSWAP-206ENST00000537582 SEMA4BQ9NPR2 832 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-206ENST00000537582 PI4KAP42356 2102 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 ARHGEF17Q96PE2 2063 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SNNO75324 88 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 WDR47O94967 919 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 RPN2P04844 631 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 ENGP17813 658 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 EPORP19235 508 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 GGT5P36269 586 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC1A6P48664 564 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 PNLIPRP1P54315 467 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 ABCE1P61221 599 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 YBX1P67809 324 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SF3A3Q12874 501 aaKnown RBP eCLIP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 PCBP2Q15366 365 aaKnown RBP eCLIP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 ARL13AQ5H913 290 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 CFAP157Q5JU67 520 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 PLA2G2CQ5R387 149 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 TTC23LQ6PF05 361 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 FRMD7Q6ZUT3 714 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 GOLGA7Q7Z5G4 137 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 TRIM48Q8IWZ4 208 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SYTL1Q8IYJ3 562 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 LRRC34Q8IZ02 419 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 TEX9Q8N6V9 391 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 DCBLD1Q8N8Z6 715 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 AGR3Q8TD06 166 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SAP25Q8TEE9 199 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 TRPC4APQ8TEL6 797 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 PRR11Q96HE9 360 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 ZNF317Q96PQ6 595 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 OR4K3Q96R72 315 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SORT1Q99523 831 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 KIR3DX1Q9H7L2 352 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 INTS7Q9NVH2 962 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 TMCO1Q9UM00 188 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SH2B3Q9UQQ2 575 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC22A14Q9Y267 594 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 HEBP2Q9Y5Z4 205 aa15.18■□□□□ 0.02
SFSWAP-206ENST00000537582 KIR2DS5A0A0G2JLQ3 304 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 A0A0G2JNG1 304 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 E7ENX8 843 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 KIR2DS3K7RE56 304 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 TRIM38O00635 465 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 KLF11O14901 512 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 STK16O75716 305 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC34A2O95436 690 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 VIMP08670 466 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 ERGP11308 486 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 XRCC1P18887 633 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 MPSTP25325 297 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 PRDX3P30048 256 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 PKLRP30613 574 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 DPP6P42658 865 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 HNMTP50135 292 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 TBPL1P62380 186 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 OCRLQ01968 901 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 TAP2Q03519 686 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 RCN2Q14257 317 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 KIR2DS5Q14953 304 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 SF3A2Q15428 464 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 CDKL4Q5MAI5 379 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 ANKS6Q68DC2 871 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 LAIR1Q6GTX8 287 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 RGS9BPQ6ZS82 235 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 RABEPKQ7Z6M1 372 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 ARL14Q8N4G2 192 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 OR56A3Q8NH54 315 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 MAGEC3Q8TD91 643 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 C1QTNF3Q9BXJ4 246 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 DRC3Q9H069 523 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 FGFR1OP2Q9NVK5 253 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 PCDHGA5Q9Y5G8 931 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 COLEC10Q9Y6Z7 277 aa15.17■□□□□ 0.02
SFSWAP-206ENST00000537582 OR7A17O14581 309 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 PPM1DO15297 605 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 SHOX2O60902 331 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 VIPP01282 170 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 PSMB5P28074 263 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 HHEXQ03014 270 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 CLCQ05315 142 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 GTF2H2Q13888 395 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 CYP2A13Q16696 494 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 ATG16L1Q676U5 607 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 GTF2H2CQ6P1K8 395 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 TRIM42Q8IWZ5 723 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 TCAIMQ8N3R3 496 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 SNX31Q8N9S9 440 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 OR4E2Q8NGC2 313 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 OR52B6Q8NGF0 335 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 RAB3IL1Q8TBN0 382 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 MAPK15Q8TD08 544 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 PPP4R1Q8TF05 950 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 THOC1Q96FV9 657 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 CDK15Q96Q40 435 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 POT1Q9NUX5 634 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms