RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FBRSL1Q9HCM7 1045 aaKnown RBP8.35□□□□□ -1.07
SRGAP1-202ENST00000537556 CTSFQ9UBX1 484 aa8.35□□□□□ -1.07
SRGAP1-202ENST00000537556 KCNK7Q9Y2U2 307 aa8.35□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM240BA0A1B0GVZ2 78 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 E2F3O00716 465 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ATP6AP2O75787 350 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 PLATP00750 562 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 EPOP01588 193 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 GLAP06280 429 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 FCER2P06734 321 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ALDOCP09972 364 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SELLP14151 372 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ARSBP15848 533 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SAT1P21673 171 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 DCTP40126 519 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CSKP41240 450 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 STARP49675 285 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 MAD2L1BPQ15013 274 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 WSCD2Q2TBF2 565 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 GPR33Q49SQ1 333 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ALG1LQ6GMV1 187 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 EIF3MQ7L2H7 374 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ADGRD2Q7Z7M1 963 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 METTL23Q86XA0 190 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CHPFQ8IZ52 775 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ABI1Q8IZP0 508 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 HS3ST5Q8IZT8 346 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 C19orf18Q8NEA5 215 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ZNF516Q92618 1163 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 VAT1Q99536 393 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 TRMOQ9BU70 441 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 MRPL4Q9BYD3 311 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 TTYH1Q9H313 450 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ASB7Q9H672 318 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 UCK1Q9HA47 277 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 POLE3Q9NRF9 147 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 RBFOX1Q9NWB1 397 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 PHF11Q9UIL8 331 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ASB4Q9Y574 426 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SIPA1L1O43166 1804 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 TNS2Q63HR2 1409 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC22A23A1A5C7 686 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 WRBO00258 174 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 WWP2O00308 870 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 C4BPAP04003 597 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 IFNA4P05014 189 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 PRKAR1AP10644 381 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 RGS6P49758 472 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 LIMK1P53667 647 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CLDN10P78369 228 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ABATP80404 500 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CREMQ03060 361 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 EMX2Q04743 252 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CSTF1Q05048 431 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ETFDHQ16134 617 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SWI5Q1ZZU3 235 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ZNF425Q6IV72 752 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CES3Q6UWW8 571 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC26A9Q7LBE3 791 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM181AQ8N9Y4 354 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ZNF675Q8TD23 568 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 AGAP2Q99490 1192 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM213AQ9BRX8 229 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CINPQ9BW66 212 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 TRIM8Q9BZR9 551 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 RIBC2Q9H4K1 309 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 RNF167Q9H6Y7 350 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 ANKEF1Q9NU02 776 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 WRAP73Q9P2S5 460 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 NDRG3Q9UGV2 375 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 TMEFF2Q9UIK5 374 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 LEF1Q9UJU2 399 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 PCDHGA9Q9Y5G4 932 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 CSADQ9Y600 493 aa8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-202ENST00000537556 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 MFSD2BA6NFX1 497 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 WASH4PA8MWX3 477 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 SGCEO43556 437 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 ALDH1A1P00352 501 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 CSF3P09919 207 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 JUPP14923 745 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 ARSAP15289 507 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 PDGFRAP16234 1089 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 C4BPBP20851 252 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 BMP8BP34820 402 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 RORCP51449 518 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 HOXC5Q00444 222 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 LGALS3BPQ08380 585 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 PLD1Q13393 1074 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms