RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 NPIPB8E9PQR5 432 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 SOCS2O14508 198 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 MAP3K13O43283 966 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 DFNA5O60443 496 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 UGDHO60701 494 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 NFATC1O95644 943 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 SOX11P35716 441 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 MYBPC1Q00872 1141 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 FNDC3BQ53EP0 1204 aaKnown RBP15.25■□□□□ 0.03
MKS1-204ENST00000537529 FRG2Q64ET8 278 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 CCDC115Q96NT0 180 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 FRG2BQ96QU4 278 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 OR52E6Q96RD3 313 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 MRPS26Q9BYN8 205 aaKnown RBP15.25■□□□□ 0.03
MKS1-204ENST00000537529 ATG10Q9H0Y0 220 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 RPF2Q9H7B2 306 aaKnown RBP15.25■□□□□ 0.03
MKS1-204ENST00000537529 SUFUQ9UMX1 484 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 ITM2BQ9Y287 266 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 NEUROG3Q9Y4Z2 214 aa15.25■□□□□ 0.03
MKS1-204ENST00000537529 H0Y858 1186 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CATP04040 527 aaKnown RBP15.24■□□□□ 0.03
MKS1-204ENST00000537529 ANXA6P08133 673 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CDH1P12830 882 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 JUPP14923 745 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 ACPPP15309 386 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CCT8P50990 548 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CTSCP53634 463 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CLDN8P56748 225 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 PFN3P60673 137 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 PLIN5Q00G26 463 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 ZNF33BQ06732 778 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CYP4F3Q08477 520 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 ABRQ12979 859 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CHIT1Q13231 466 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 GK3PQ14409 553 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 ATP6AP1Q15904 470 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 TMTC4Q5T4D3 741 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 LIPJQ5W064 366 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CYP2U1Q7Z449 544 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 RBM23Q86U06 439 aaKnown RBP15.24■□□□□ 0.03
MKS1-204ENST00000537529 ETFBKMTQ8IXQ9 262 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CBR4Q8N4T8 237 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 MFSD2AQ8NA29 543 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CLHC1Q8NHS4 586 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 OR8D1Q8WZ84 308 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 DTD2Q96FN9 168 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CCDC138Q96M89 665 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 TSC22D3Q99576 134 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 WRAP53Q9BUR4 548 aaKnown RBP15.24■□□□□ 0.03
MKS1-204ENST00000537529 VAPAQ9P0L0 249 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 EDDM13A0A1B0GTR0 161 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 FAM149AA5PLN7 773 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 TMEM202A6NGA9 273 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 LDLRP01130 860 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 GGT1P19440 569 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 ITGB7P26010 798 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 VIPR2P41587 438 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 GRIA2P42262 883 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 NEK2P51955 445 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 POLE2P56282 527 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 IRF8Q02556 426 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 TMEM115Q12893 351 aaPredicted RBP15.24■□□□□ 0.03
MKS1-204ENST00000537529 SLC44A4Q53GD3 710 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 CARM1Q86X55 608 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 EPHX4Q8IUS5 362 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 DTWD1Q8N5C7 304 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 BPIFB1Q8TDL5 484 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 NXPE3Q969Y0 559 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 COQ10AQ96MF6 247 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 ZCCHC2Q9C0B9 1178 aaKnown RBP15.24■□□□□ 0.03
MKS1-204ENST00000537529 RMND5AQ9H871 391 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 DLGAP4Q9Y2H0 992 aa15.24■□□□□ 0.03
MKS1-204ENST00000537529 NUP210Q8TEM1 1887 aaPredicted RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 SLC5A10A0PJK1 596 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 ARHGAP10A1A4S6 786 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 KRT87PA6NCN2 255 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 GSTA4O15217 222 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 C7P10643 843 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 S100A3P33764 101 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 PLOD1Q02809 727 aaPredicted RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 ELP6Q0PNE2 266 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 CSTF3Q12996 717 aaKnown RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 PLA2G4EQ3MJ16 856 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 SPRED1Q7Z699 444 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 UBE2Q1Q7Z7E8 422 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 THOC6Q86W42 341 aaKnown RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 KLHDC8AQ8IYD2 350 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 C7orf61Q8IZ16 206 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 TMIEQ8NEW7 156 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 OR2T12Q8NG77 320 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 CSGALNACT1Q8TDX6 532 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 FOPNLQ96NB1 174 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 THUMPD3Q9BV44 507 aaKnown RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 NDUFA13Q9P0J0 144 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 PCDHGB4Q9UN71 923 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 PCDHGB5Q9Y5G0 923 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 CLGNO14967 610 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 ERN1O75460 977 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms