RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 C1QTNF3-AMACRE9PGA6 284 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 RNASEH1O60930 286 aaKnown RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 TNFAIP8O95379 198 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 PGRP06401 933 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 UBTFL6P0CB48 400 aaPredicted RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 BMP1P13497 986 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FSHRP23945 695 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 EIF2DP41214 584 aaKnown RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 CASP2P42575 452 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 RPS14P62263 151 aaKnown RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMG6-203ENST00000536871 DUSP6Q16828 381 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 LRRC73Q5JTD7 316 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 C7orf61Q8IZ16 206 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 SLC22A15Q8IZD6 547 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 LIX1Q8N485 282 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CPA6Q8N4T0 437 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 LRTOMTQ8WZ04 291 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 TESCQ96BS2 214 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CENPNQ96H22 339 aaPredicted RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 NSMCE2Q96MF7 247 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 GBP5Q96PP8 586 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 P2RY13Q9BPV8 354 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
SMG6-203ENST00000536871 BRCA2P51587 3418 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 ZNF839A8K0R7 811 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 AREL1O15033 823 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 EPORP19235 508 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 IRF8Q02556 426 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 ADRM1Q16186 407 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 CYP51A1Q16850 503 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 TMEM52BQ4KMG9 183 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 FAM46CQ5VWP2 391 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 SLC2A7Q6PXP3 512 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 ZBTB49Q6ZSB9 765 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 TRIM74Q86UV6 250 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 TRIM73Q86UV7 250 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 SPPL2CQ8IUH8 684 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 NPAS3Q8IXF0 933 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 RASGEF1AQ8N9B8 481 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 REPS1Q96D71 796 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
SMG6-203ENST00000536871 ACPTQ9BZG2 426 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 BRF2Q9HAW0 419 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 VCX3AQ9NNX9 186 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 PADI4Q9UM07 663 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 GMEB1Q9Y692 573 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 PLXNA2O75051 1894 aa13.22□□□□□ -0.29
SMG6-203ENST00000536871 BPTFQ12830 3046 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 C9JVG2 144 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 H0YIV9 168 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 VEGFDO43915 354 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 PDYNP01213 254 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 BCKDHAP12694 445 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 HALP42357 657 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 HMGCS1Q01581 520 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 ABRQ12979 859 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 RABL3Q5HYI8 236 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 FAM78AQ5JUQ0 283 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 TMTC4Q5T4D3 741 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 C9orf64Q5T6V5 341 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 UGT2A3Q6UWM9 527 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 SERPINA13PQ6UXR4 307 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 VRK3Q8IV63 474 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 MFSD2AQ8NA29 543 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 NUS1Q96E22 293 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 ITCHQ96J02 903 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 FCRL1Q96LA6 429 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 KCNH6Q9H252 994 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 EGFL7Q9UHF1 273 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 AURKCQ9UQB9 309 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 SLC22A14Q9Y267 594 aa13.21□□□□□ -0.29
SMG6-203ENST00000536871 OR2AG2A6NM03 316 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 INPP4BO15327 924 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 TSPAN6O43657 245 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 MYO1DO94832 1006 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 PSMC3P17980 439 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 PRPS1L1P21108 318 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 S100A3P33764 101 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 LBX1P52954 281 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 C21orf58P58505 322 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 PFN3P60673 137 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 SRSF11Q05519 484 aaKnown RBP13.21□□□□□ -0.3
SMG6-203ENST00000536871 LRRC74AQ0VAA2 488 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 SFSWAPQ12872 951 aaKnown RBP13.21□□□□□ -0.3
SMG6-203ENST00000536871 CHIT1Q13231 466 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 FAM174BQ3ZCQ3 159 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 SGO1Q5FBB7 561 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.3
SMG6-203ENST00000536871 ATG9BQ674R7 924 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms