RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GALNT16Q8N428 558 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 OR6P1Q8NGX9 317 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ASZ1Q8WWH4 475 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CUEDC1Q9NWM3 386 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 P4HTMQ9NXG6 502 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 EURLQ9NYK6 297 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PLEKHB1Q9UF11 243 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CNTRLQ7Z7A1 2325 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 A0A0U1RQJ8 604 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 LIASO43766 372 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CNOT3O75175 753 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SEMA7AO75326 666 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 MAGP20916 626 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 GRIA1P42261 906 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PRAMEP78395 509 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ACVR1Q04771 509 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 MYBPC3Q14896 1274 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 OASLQ15646 514 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ZNF534Q76KX8 674 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 FAM20CQ8IXL6 584 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DLG3Q92796 817 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SLC22A18Q96BI1 424 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ZNF778Q96MU6 729 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DESI2Q9BSY9 194 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CARD6Q9BX69 1037 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 FRMD8P1Q9BZ68 369 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ANAPC5Q9UJX4 755 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ZNF148Q9UQR1 794 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DOCK10Q96BY6 2186 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CELSR2Q9HCU4 2923 aa18.93■□□□□ 0.62
TNFRSF1B-204ENST00000536782 GPC4O75487 556 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 APOA4P06727 396 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 RNF224P0DH78 156 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CD9P21926 228 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ALAS2P22557 587 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 MRPL49Q13405 166 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CYP2A13Q16696 494 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 EIF2S3LQ2VIR3 472 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PLEKHN1Q494U1 663 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 AARS2Q5JTZ9 985 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SEL1L2Q5TEA6 688 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 IGFL3Q6UXB1 125 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 UNC5DQ6UXZ4 953 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TMEM139Q8IV31 216 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 VRK3Q8IV63 474 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 MCATQ8IVS2 390 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DCUN1D3Q8IWE4 304 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 IQCKQ8N0W5 287 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 LINC01555Q8NAE3 123 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CFAP61Q8NHU2 1237 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DENND1AQ8TEH3 1009 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PEX13Q92968 403 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CASS4Q9NQ75 786 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 B3GNT3Q9Y2A9 372 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 KLHL20Q9Y2M5 609 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TCAF1Q9Y4C2 921 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CAPN6Q9Y6Q1 641 aa18.92■□□□□ 0.62
TNFRSF1B-204ENST00000536782 IPO13O94829 963 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 S1PR4O95977 384 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 UMODP07911 640 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ARSFP54793 590 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 FOXL2P58012 376 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SEMA3AQ14563 771 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TTLL10Q6ZVT0 673 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PPP1R32Q7Z5V6 425 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 C2orf73Q8N5S3 287 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PPHLN1Q8NEY8 458 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PRR7Q8TB68 274 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 LKAAEAR1Q8TD35 194 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TM9SF4Q92544 642 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SNRNP40Q96DI7 357 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 C19orf60Q96EN9 201 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 MENTQ9BUN1 341 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ZNF552Q9H707 407 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ATP13A2Q9NQ11 1180 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 RAB6BQ9NRW1 208 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 INTS7Q9NVH2 962 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CIDEBQ9UHD4 219 aa18.91■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CREBBPQ92793 2442 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 A0A1B0GX78 115 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 IQCF5A8MTL0 148 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 KRT86O43790 486 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PIM1P11309 404 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 GCGRP47871 477 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SOX8P57073 446 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 GRB7Q14451 532 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TMED2Q15363 201 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ZC3H12BQ5HYM0 836 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TAX1BP1Q86VP1 789 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 RNF10Q8N5U6 811 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 OR2L8Q8NGY9 312 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 C1orf54Q8WWF1 131 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 NACC2Q96BF6 587 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 IL17FQ96PD4 163 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ILKAPQ9H0C8 392 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SLC22A11Q9NSA0 550 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CATSPERZQ9NTU4 200 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SLC39A10Q9ULF5 831 aa18.9■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PCM1Q15154 2024 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms