RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 DAPK2Q9UIK4 370 aa5.05□□□□□ -1.6
PRKDC-208ENST00000536710 ITGA11Q9UKX5 1188 aa5.05□□□□□ -1.6
PRKDC-208ENST00000536710 A0A1W2PS18 150 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 DENND3A2RUS2 1198 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 INO80B-WBP1J3KQ70 363 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 IFIT3O14879 490 aaKnown RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 RNASEH1O60930 286 aaKnown RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 RPS6KA5O75582 802 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 PGLSO95336 258 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 GSRP00390 522 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 NR3C1P04150 777 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 RLN1P04808 185 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 IRF2P14316 349 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 DGKAP23743 735 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 SOAT1P35610 550 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 MTCP1P56278 107 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 COASYQ13057 564 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 GAGE5Q13069 117 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 GAGE6Q13070 117 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 FHL1Q13642 323 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 KEAP1Q14145 624 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 TAZQ16635 292 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 CA9Q16790 459 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 LBHQ53QV2 105 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 ODF2Q5BJF6 829 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 ZNF449Q6P9G9 518 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 ZNF554Q86TJ5 538 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 EXOC3L1Q86VI1 746 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 METTL27Q8N6F8 245 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 ZNF713Q8N859 430 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 MAB21L3Q8N8X9 362 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 POC1AQ8NBT0 407 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 OR11H4Q8NGC9 324 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 OR1J1Q8NGS3 322 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 OCC1Q8TAD7 63 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 GRK7Q8WTQ7 553 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 CD101Q93033 1021 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 NSL1Q96IY1 281 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 MEIS3Q99687 375 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 URM1Q9BTM9 101 aaKnown RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 DDX31Q9H8H2 851 aaKnown RBP5.04□□□□□ -1.6
PRKDC-208ENST00000536710 MINDY3Q9H8M7 445 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 DNAJC4Q9NNZ3 241 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 A4GALTQ9NPC4 353 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 SEPT10Q9P0V9 454 aa5.04□□□□□ -1.6
PRKDC-208ENST00000536710 TAF1P21675 1872 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 CKAP5Q14008 2032 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 PLOD2O00469 737 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 SNRNP70P08621 437 aaKnown RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 SPP1P10451 314 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 EPCAMP16422 314 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 LBPP18428 481 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 MSH3P20585 1137 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 KCNJ1P48048 391 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 GSDMDP57764 484 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 PTENP60484 403 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 UGP2Q16851 508 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ODF4Q2M2E3 257 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ZNF674Q2M3X9 581 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ANKRD20A4Q4UJ75 823 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 LACTB2Q53H82 288 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ANKRD20A8PQ5CZ79 823 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 CCDC158Q5M9N0 1113 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ANKRD20A2Q5SQ80 823 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ANKRD20A1Q5TYW2 823 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ANKRD20A3Q5VUR7 823 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ZNF324BQ6AW86 544 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 FOXP4Q8IVH2 680 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 SAMD14Q8IZD0 417 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 SYCP3Q8IZU3 236 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 KBTBD3Q8NAB2 608 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 MSANTD4Q8NCY6 345 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 DMBX1Q8NFW5 382 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 OR2T12Q8NG77 320 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 LMO3Q8TAP4 145 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 RAD54LQ92698 747 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 DNASE1L2Q92874 299 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 PARK7Q99497 189 aaKnown RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 PSD2Q9BQI7 771 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 MLPHQ9BV36 600 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-208ENST00000536710 PANK2Q9BZ23 570 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 ECHDC1Q9NTX5 307 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 WDR83OSQ9Y284 106 aa5.03□□□□□ -1.6
PRKDC-208ENST00000536710 A0A1W2PPK0 400 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 ANKRD61A6NGH8 418 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 PPIP5K2O43314 1243 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 ATP1A1P05023 1023 aaKnown RBP5.02□□□□□ -1.61
PRKDC-208ENST00000536710 RGS7P49802 495 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 TNK1Q13470 666 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 NPTX1Q15818 432 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 MEP1BQ16820 701 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 CTU2Q2VPK5 515 aaKnown RBP5.02□□□□□ -1.61
PRKDC-208ENST00000536710 UGT3A2Q3SY77 523 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 CASC4Q6P4E1 433 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 IYDQ6PHW0 289 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 SPSB3Q6PJ21 355 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
PRKDC-208ENST00000536710 NRARPQ7Z6K4 114 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms