RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 E7ESA3 106 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 TERTO14746 1132 aaKnown RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 NKX2-8O15522 239 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 SCRG1O75711 98 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 AHSGP02765 367 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 PRB1P04280 392 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 RPN2P04844 631 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 ATP5DP30049 168 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 GABRA4P48169 554 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 CDKN2DP55273 166 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 ABHD18Q0P651 414 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 PDIA2Q13087 525 aaKnown RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 MAP7Q14244 749 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 FASTKQ14296 549 aaKnown RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 KIR2DS3Q14952 304 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 TMTC4Q5T4D3 741 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 ATP1A1-AS1Q5TC04 95 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 DUPD1Q68J44 220 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 FAM199XQ6PEV8 388 aaPredicted RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 CYHR1Q6ZMK1 362 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 PIWIL4Q7Z3Z4 852 aaKnown RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 CPNE9Q8IYJ1 553 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 FBXO36Q8NEA4 188 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 OR2L8Q8NGY9 312 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 UBL7Q96S82 380 aaPredicted RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 NAT9Q9BTE0 207 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 GPN2Q9H9Y4 310 aaPredicted RBP12.7□□□□□ -0.38
PRKDC-206ENST00000536429 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 DHRS7Q9Y394 339 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 SPTBP11277 2137 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 A0A1W2PPV9 198 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 SMAPO00193 183 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PSIP1O75475 530 aaKnown RBP12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PIAS1O75925 651 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 MAGP20916 626 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PSMB5P28074 263 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 YBX1P67809 324 aaKnown RBP12.69□□□□□ -0.38
PRKDC-206ENST00000536429 GPS2Q13227 327 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 SLC5A12Q1EHB4 618 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 LCN10Q6JVE6 187 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
PRKDC-206ENST00000536429 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 CT55Q8WUE5 264 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 INPP5DQ92835 1189 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 EXTL1Q92935 676 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 RAD51AP1Q96B01 352 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 LRRC39Q96DD0 335 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 SLC45A3Q96JT2 553 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PKP4Q99569 1192 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 SEMA4CQ9C0C4 833 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 CCDC68Q9H2F9 335 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PPANQ9NQ55 473 aaKnown RBP12.69□□□□□ -0.38
PRKDC-206ENST00000536429 LHX9Q9NQ69 397 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 PSAT1Q9Y617 370 aa12.69□□□□□ -0.38
PRKDC-206ENST00000536429 H3BMH7 237 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 ERVH48-1M5A8F1 160 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 ATXN7O15265 892 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-206ENST00000536429 KDM1AO60341 852 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 NRP2O60462 931 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 MSL3P1P0C860 447 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 PRKAR1AP10644 381 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 MCM3P25205 808 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 DLSTP36957 453 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 RHDQ02161 417 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 TTLL9Q3SXZ7 439 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 LINC00303Q3SY05 128 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 FCRL6Q6DN72 434 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 CAPN12Q6ZSI9 719 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 BPHLQ86WA6 291 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-206ENST00000536429 ZBED8Q8IZ13 594 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 DNAJC22Q8N4W6 341 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 STARD8Q92502 1023 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 DLG3Q92796 817 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 TCTN2Q96GX1 697 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 FCRL4Q96PJ5 515 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 SPRTNQ9H040 489 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-206ENST00000536429 SMYD2Q9NRG4 433 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 WHRNQ9P202 907 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 KLHL42Q9P2K6 505 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 CDC23Q9UJX2 597 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
PRKDC-206ENST00000536429 MYO1CO00159 1063 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 CPNE3O75131 537 aaKnown RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 VPS26AO75436 327 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ERGP11308 486 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 OAS2P29728 719 aaKnown RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 RORAP35398 523 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 CCNFP41002 786 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 GRIA3P42263 894 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 SLC7A5Q01650 507 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 CBLBQ13191 982 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 LY6DQ14210 128 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 SF1Q15637 639 aaKnown RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 TBR1Q16650 682 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms