RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 TAS2R39P59534 338 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 MC2RQ01718 297 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CLN3Q13286 438 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 EFTUD2Q15029 972 aaKnown RBP eCLIP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 UAP1Q16222 522 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 BROXQ5VW32 411 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 WDR93Q6P2C0 686 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 FAM92BQ6ZTR7 304 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 PIWIL4Q7Z3Z4 852 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 GSPT2Q8IYD1 628 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CARFQ8N187 725 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 FBXO15Q8NCQ5 510 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 EEF1AKMT1Q8WVE0 214 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 ASB11Q8WXH4 323 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 PDLIM5Q96HC4 596 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CRELD1Q96HD1 420 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CCDC77Q9BR77 488 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 ASPSCR1Q9BZE9 553 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 ZNF768Q9H5H4 540 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 SIDT1Q9NXL6 827 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 SPATA7Q9P0W8 599 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 ICKQ9UPZ9 632 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 RUVBL2Q9Y230 463 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 TLCD2A6NGC4 264 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 C2orf74A8MZ97 194 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 GFYI3L273 518 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 RASGRF2O14827 1237 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 SLC16A5O15375 505 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 KRT38O76015 456 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 LIPCP11150 499 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 POLR2CP19387 275 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-205ENST00000536255 CNTFP26441 200 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 PKLRP30613 574 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 MSH2P43246 934 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 BDKRB1P46663 353 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 SERPINB9P50453 376 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 UCNP55089 124 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 RAB10P61026 200 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 PPP1CAP62136 330 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 VSNL1P62760 191 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 ERCC6LQ2NKX8 1250 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 DCAF12Q5T6F0 453 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 ANKS6Q68DC2 871 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-205ENST00000536255 ZFAND4Q86XD8 727 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 MCOLN3Q8TDD5 553 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 SLC44A1Q8WWI5 657 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 KLHL6Q8WZ60 621 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 MRRFQ96E11 262 aaKnown RBP13.1□□□□□ -0.31
RPAIN-205ENST00000536255 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 XKR8Q9H6D3 395 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 FBXO8Q9NRD0 319 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPAIN-205ENST00000536255 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 B3GALT1Q9Y5Z6 326 aa13.1□□□□□ -0.31
RPAIN-205ENST00000536255 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-205ENST00000536255 CHD6Q8TD26 2715 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 ARHGEF33A8MVX0 844 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-205ENST00000536255 POC1B-GALNT4F8VUJ3 575 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 STMND1H3BQB6 276 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 MYO1CO00159 1063 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 BTN3A3O00478 584 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 BTN3A1O00481 513 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 MAP3K7O43318 606 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 FAM155BO75949 473 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 CHRM5P08912 532 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-205ENST00000536255 HIST1H2AGP0C0S8 130 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-205ENST00000536255 HIST1H2ADP20671 130 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 CRABP2P29373 138 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 SEPHS1P49903 392 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 ARHGAP19Q14CB8 494 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 TGIF1Q15583 401 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 EMBQ6PCB8 327 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 RAPH1Q70E73 1250 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 CEP97Q8IW35 865 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 ADGRF3Q8IZF5 1079 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
RPAIN-205ENST00000536255 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-205ENST00000536255 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 TEFMQ96QE5 360 aaKnown RBP13.09□□□□□ -0.31
RPAIN-205ENST00000536255 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms