RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 WDR54Q9H977 334 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ARNT2Q9HBZ2 717 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ZBTB20Q9HC78 741 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 IMPACTQ9P2X3 320 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 EFR3BQ9Y2G0 817 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NTNG1Q9Y2I2 539 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FER1L5A0AVI2 2057 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PCM1Q15154 2024 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 H3BMH7 237 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 DSCR3O14972 297 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 HCRTR1O43613 425 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CNOT3O75175 753 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ALOX12BO75342 701 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 IPO7O95373 1038 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TPH1P17752 444 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CTNNA1P35221 906 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PPARGP37231 505 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RWDD2BP57060 319 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GRM7Q14831 915 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TCTE1Q5JU00 501 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 YOD1Q5VVQ6 348 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FCRL6Q6DN72 434 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 DENND5AQ6IQ26 1287 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TTC23LQ6PF05 361 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PACS1Q6VY07 963 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 KCNMB4Q86W47 210 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 DNAJC22Q8N4W6 341 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RAB42Q8N4Z0 105 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GSDMBQ8TAX9 411 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GRHL3Q8TE85 626 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FAR1Q8WVX9 515 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SOX17Q9H6I2 414 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SEMA3GQ9NS98 782 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CUTCQ9NTM9 273 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SLC39A10Q9ULF5 831 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ENTPD4Q9Y227 616 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CCDC88CQ9P219 2028 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 A0A1B0GUH1 482 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PRSS44E7EML9 344 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PSMD3O43242 534 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 S1PR4O95977 384 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CTSBP07858 339 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PTMSP20962 102 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ACADLP28330 430 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PKLRP30613 574 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CARSP49589 748 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 TMED2Q15363 201 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SF1Q15637 639 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ZRSR2Q15696 482 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 NKG7Q16617 165 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PARP6Q2NL67 630 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 DNAJC21Q5F1R6 531 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CRB2Q5IJ48 1285 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 LINC00696Q6ZRV3 163 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SHISA6Q6ZSJ9 500 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 OVCH1Q7RTY7 1134 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 LINC00523Q86TU6 105 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 MCATQ8IVS2 390 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PIANPQ8IYJ0 282 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 BCORP1Q8N888 145 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 DNAAF3Q8N9W5 541 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CFAP61Q8NHU2 1237 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CALR3Q96L12 384 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 BARD1Q99728 777 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SELENOSQ9BQE4 189 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CRB3Q9BUF7 120 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 OLAHQ9NV23 265 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 KLHL20Q9Y2M5 609 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PCDHA13Q9Y5I0 950 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CSAG2Q9Y5P2 127 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PRSS21Q9Y6M0 314 aa12.45□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SLC5A10A0PJK1 596 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SOCS6O14544 535 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 MAP2K7O14733 419 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ZG16O60844 167 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 APOA4P06727 396 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ERVK-10P10266 1014 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PEBP1P30086 187 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PTPN7P35236 360 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ARG2P78540 354 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 OCA2Q04671 838 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 HSPA14Q0VDF9 509 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 FAM214AQ32MH5 1076 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 AFTPHQ6ULP2 937 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ISLR2Q6UXK2 745 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 NLRP9Q7RTR0 991 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 FJX1Q86VR8 437 aa12.44□□□□□ -0.42
TNFRSF1A-207ENST00000535958 FAM20CQ8IXL6 584 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms