RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 LMF2Q9BU23 707 aaKnown RBP3.59□□□□□ -1.83
VBP1-203ENST00000535916 FNDC11Q9BVV2 318 aa3.59□□□□□ -1.83
VBP1-203ENST00000535916 THAP2Q9H0W7 228 aa3.59□□□□□ -1.83
VBP1-203ENST00000535916 CHST11Q9NPF2 352 aa3.59□□□□□ -1.83
VBP1-203ENST00000535916 TMEM98Q9Y2Y6 226 aa3.59□□□□□ -1.83
VBP1-203ENST00000535916 CSNK1G3Q9Y6M4 447 aa3.59□□□□□ -1.83
VBP1-203ENST00000535916 MYO1GB0I1T2 1018 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 CREG1O75629 220 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 DDHD2O94830 711 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 VTNP04004 478 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 RB1P06400 928 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 IL4RP24394 825 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 CDH8P55286 799 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 GCNT1Q02742 428 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 MTF1Q14872 753 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 HERC3Q15034 1050 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 ABHD12Q8N2K0 398 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 WDTC1Q8N5D0 677 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.58□□□□□ -1.84
VBP1-203ENST00000535916 NPEPL1Q8NDH3 523 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 OR11H4Q8NGC9 324 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 OR1L3Q8NH93 324 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 MOSPD2Q8NHP6 518 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 TDRD7Q8NHU6 1098 aaKnown RBP3.58□□□□□ -1.84
VBP1-203ENST00000535916 GATAD1Q8WUU5 269 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 PGAM5Q96HS1 289 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 C7orf26Q96N11 449 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 PPANQ9NQ55 473 aaKnown RBP3.58□□□□□ -1.84
VBP1-203ENST00000535916 ABCB10Q9NRK6 738 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 NDE1Q9NXR1 346 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 LARSQ9P2J5 1176 aaKnown RBP3.58□□□□□ -1.84
VBP1-203ENST00000535916 TNNQ9UQP3 1299 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 ZNF510Q9Y2H8 683 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 RPS6KL1Q9Y6S9 549 aa3.58□□□□□ -1.84
VBP1-203ENST00000535916 NPHP1O15259 732 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 GLRA3O75311 464 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 IGHEP01854 428 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 CSNK2BP67870 215 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 MTHFSDQ2M296 383 aaKnown RBP3.57□□□□□ -1.84
VBP1-203ENST00000535916 PDLIM3Q53GG5 364 aaPredicted RBP3.57□□□□□ -1.84
VBP1-203ENST00000535916 FIGLAQ6QHK4 219 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 IKBIPQ70UQ0 350 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 CHST9Q7L1S5 443 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 PAPD5Q8NDF8 572 aaKnown RBP3.57□□□□□ -1.84
VBP1-203ENST00000535916 OR13C3Q8NGS6 347 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 CHPT1Q8WUD6 406 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 PDLIM5Q96HC4 596 aaKnown RBP3.57□□□□□ -1.84
VBP1-203ENST00000535916 ZNF577Q9BSK1 485 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 B3GAT1Q9P2W7 334 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 SWAP70Q9UH65 585 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 PGAP2Q9UHJ9 254 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 PRO0461Q9UI25 63 aa3.57□□□□□ -1.84
VBP1-203ENST00000535916 OR10H2O60403 315 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 CLTBP09497 229 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 SLC2A2P11168 524 aaPredicted RBP3.56□□□□□ -1.84
VBP1-203ENST00000535916 LAMP2P13473 410 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 BCL3P20749 454 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 CDH3P22223 829 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 GABRA5P31644 462 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 MTHFRP42898 656 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 ALFQ53S48 1182 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 FRRS1Q6ZNA5 592 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 TMPRSS11FQ6ZWK6 438 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 MARCH9Q86YJ5 346 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 SLC34A3Q8N130 599 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 AFAP1Q8N556 730 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 IL17REQ8NFR9 667 aa3.56□□□□□ -1.84
VBP1-203ENST00000535916 LNP1A1A4G5 178 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 MITFO75030 526 aaPredicted RBP3.55□□□□□ -1.84
VBP1-203ENST00000535916 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 HOXD4P09016 255 aaPredicted RBP3.55□□□□□ -1.84
VBP1-203ENST00000535916 THEGLP0DJG4 465 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 HSPA8P11142 646 aaKnown RBP3.55□□□□□ -1.84
VBP1-203ENST00000535916 MAN1A1P33908 653 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 TSFMP43897 325 aaKnown RBP3.55□□□□□ -1.84
VBP1-203ENST00000535916 LBX1P52954 281 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 CD300CQ08708 224 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 TAF10Q12962 218 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 SIM2Q14190 667 aaPredicted RBP3.55□□□□□ -1.84
VBP1-203ENST00000535916 CRYMQ14894 314 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 ELFN2Q5R3F8 820 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 CES4AQ5XG92 561 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 CCDC70Q6NSX1 233 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 TEX19Q8NA77 164 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 RAD9AQ99638 391 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 ITPAQ9BY32 194 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 IRAK4Q9NWZ3 460 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 SPHK1Q9NYA1 384 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 C9orf78Q9NZ63 289 aaPredicted RBP3.55□□□□□ -1.84
VBP1-203ENST00000535916 HACL1Q9UJ83 578 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 CELA1Q9UNI1 258 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 GTF2A1LQ9UNN4 478 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 GRIP1Q9Y3R0 1128 aa3.55□□□□□ -1.84
VBP1-203ENST00000535916 PCDH11YQ9BZA8 1340 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 ENO4A6NNW6 628 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 EPHB6O15197 1021 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 MED24O75448 989 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 TBX18O95935 607 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 MELTFP08582 738 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms