RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SERPINB8P50452 374 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CYP2A13Q16696 494 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CACHD1Q5VU97 1274 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 ANKS6Q68DC2 871 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 SBSNQ6UWP8 590 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 PRSS42Q7Z5A4 293 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 TAX1BP1Q86VP1 789 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 FLVCR1-AS1Q8TAF5 88 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 HMGCLL1Q8TB92 370 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 MCOLN3Q8TDD5 553 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 ISL2Q96A47 359 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 PPM1MQ96MI6 270 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 OR2A14Q96R47 310 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CD180Q99467 661 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 MAP3K3Q99759 626 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 RAB11FIP5Q9BXF6 653 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 SPATA7Q9P0W8 599 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.67□□□□□ -0.54
CHD4-203ENST00000535717 SEMA5BQ9P283 1151 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CTNNAL1Q9UBT7 734 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 ACOT9Q9Y305 439 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 MSRB2Q9Y3D2 182 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 FREM2Q5SZK8 3169 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 A0A087X1B8 175 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 CCDC187A0A096LP49 1063 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 A0A096LPK6 155 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 TLCD2A6NGC4 264 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 HGSO14964 777 aaPredicted RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 TOX3O15405 576 aaPredicted RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 PRICKLE3O43900 615 aaPredicted RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 RASSF9O75901 435 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 KRT37O76014 449 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 SNRPAP09012 282 aaKnown RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 ANKRD34CP0C6C1 535 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 CD1DP15813 335 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 UGT2B7P16662 529 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 TYK2P29597 1187 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 SLC26A3P40879 764 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 MAGEA12P43365 314 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 LSSP48449 732 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 PNLIPRP1P54315 467 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 ATP6V0D1P61421 351 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 IRF9Q00978 393 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 DLG1Q12959 904 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 FASTKQ14296 549 aaKnown RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 CSHL1Q14406 222 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 KIR2DS3Q14952 304 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 ARHGAP19Q14CB8 494 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 TSNQ15631 228 aaKnown RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 PPP1R3AQ16821 1122 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 SPESP1Q6UW49 350 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 MBOAT1Q6ZNC8 495 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 RAB11FIP2Q7L804 512 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 TRIM73Q86UV7 250 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 CENPLQ8N0S6 344 aaPredicted RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 RAB42Q8N4Z0 105 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 MREGQ8N565 214 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 OR2W6PQ8NHA6 318 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 ZNF480Q8WV37 535 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 KLHL6Q8WZ60 621 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 CCDC138Q96M89 665 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 ZNF768Q9H5H4 540 aaKnown RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 IGSF5Q9NSI5 407 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 PSMC3IPQ9P2W1 217 aaPredicted RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 TLK1Q9UKI8 766 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 ANGPTL2Q9UKU9 493 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 NOVA2Q9UNW9 492 aaKnown RBP11.66□□□□□ -0.54
CHD4-203ENST00000535717 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
CHD4-203ENST00000535717 ANKRD12Q6UB98 2062 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 A0A1W2PPV9 198 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 TRABD2BA6NFA1 517 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 ISM1B1AKI9 464 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 E7ENX8 843 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 RFPL1O75677 317 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 MPOP05164 745 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 ENO2P09104 434 aaPredicted RBP11.65□□□□□ -0.54
CHD4-203ENST00000535717 LTA4HP09960 611 aaKnown RBP11.65□□□□□ -0.54
CHD4-203ENST00000535717 NUDT17P0C025 328 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 HIST1H2AGP0C0S8 130 aaPredicted RBP11.65□□□□□ -0.54
CHD4-203ENST00000535717 HGFP14210 728 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 HIST1H2ADP20671 130 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 IMPA1P29218 277 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 CSTF2P33240 577 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD4-203ENST00000535717 HSD17B2P37059 387 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 SLCO1A2P46721 670 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 SEPHS1P49903 392 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 TAP2Q03519 686 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 OR4D1Q15615 310 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 SLC5A12Q1EHB4 618 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 TAF1BQ53T94 588 aaPredicted RBP11.65□□□□□ -0.54
CHD4-203ENST00000535717 C3orf38Q5JPI3 329 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 LGSNQ5TDP6 509 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 TIFABQ6ZNK6 161 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 CCDC91Q7Z6B0 441 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 ADAMTSL2Q86TH1 951 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 TBC1D1Q86TI0 1168 aaPredicted RBP11.65□□□□□ -0.54
CHD4-203ENST00000535717 TDRPQ86YL5 185 aa11.65□□□□□ -0.54
CHD4-203ENST00000535717 FAM20CQ8IXL6 584 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms