RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ANKRD12Q6UB98 2062 aa20.48■□□□□ 0.87
SSH3-211ENST00000534112 A0A1B0GX78 115 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 AKR1B15C9JRZ8 316 aaPredicted RBP20.47■□□□□ 0.87
SSH3-211ENST00000534112 KDM1AO60341 852 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 ALBP02768 609 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 PIM1P11309 404 aaPredicted RBP20.47■□□□□ 0.87
SSH3-211ENST00000534112 MAGP20916 626 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 CTNNA1P35221 906 aaKnown RBP20.47■□□□□ 0.87
SSH3-211ENST00000534112 PTPN7P35236 360 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 PER3P56645 1201 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 NKG7Q16617 165 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 PARP6Q2NL67 630 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 SYTL3Q4VX76 610 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 IRAK1BP1Q5VVH5 260 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 KIRREL2Q6UWL6 708 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 PACS1Q6VY07 963 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 DENND1AQ8TEH3 1009 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 FAR1Q8WVX9 515 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 ALS2CR12Q96Q35 445 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 SPSB2Q99619 263 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 PCDHA13Q9Y5I0 950 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 HS3ST3B1Q9Y662 390 aa20.47■□□□□ 0.87
SSH3-211ENST00000534112 MROH6A6NGR9 719 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 EDN3P14138 238 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 PSMA3P25788 255 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 MSNP26038 577 aaKnown RBP20.46■□□□□ 0.87
SSH3-211ENST00000534112 PKLRP30613 574 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 RAB28P51157 221 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 CDC16Q13042 620 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 ZNF169Q14929 603 aaPredicted RBP20.46■□□□□ 0.87
SSH3-211ENST00000534112 ZRSR2Q15696 482 aaKnown RBP20.46■□□□□ 0.87
SSH3-211ENST00000534112 PARP9Q8IXQ6 854 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 CNDP1Q96KN2 507 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 SLC26A1Q9H2B4 701 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 LRRC40Q9H9A6 602 aa20.46■□□□□ 0.87
SSH3-211ENST00000534112 PIH1D1Q9NWS0 290 aaKnown RBP20.46■□□□□ 0.87
SSH3-211ENST00000534112 OR51F1A6NGY5 319 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 HNRNPRO43390 633 aaKnown RBP20.45■□□□□ 0.86
SSH3-211ENST00000534112 METTL18O95568 372 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 OR56A5P0C7T3 313 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 TLR1Q15399 786 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 DNAJC21Q5F1R6 531 aaKnown RBP20.45■□□□□ 0.86
SSH3-211ENST00000534112 B3GNTL1Q67FW5 361 aaPredicted RBP20.45■□□□□ 0.86
SSH3-211ENST00000534112 ARHGEF18Q6ZSZ5 1173 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 COX15Q7KZN9 410 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 LINC01555Q8NAE3 123 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.45■□□□□ 0.86
SSH3-211ENST00000534112 MARVELD3Q96A59 401 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 LHPPQ9H008 270 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 MRM3Q9HC36 420 aaKnown RBP20.45■□□□□ 0.86
SSH3-211ENST00000534112 LUC7LQ9NQ29 371 aaKnown RBP20.45■□□□□ 0.86
SSH3-211ENST00000534112 IMPACTQ9P2X3 320 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 ENTPD4Q9Y227 616 aa20.45■□□□□ 0.86
SSH3-211ENST00000534112 SVILO95425 2214 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 CCDC162PA2VCL2 907 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 DSCR3O14972 297 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 OR1I1O60431 355 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 ZG16O60844 167 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 ZNF189O75820 626 aaPredicted RBP20.44■□□□□ 0.86
SSH3-211ENST00000534112 TJP3O95049 919 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 PRF1P14222 555 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 MCM3P25205 808 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 FOXN2P32314 431 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 GRIA3P42263 894 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 CSE1LP55060 971 aaKnown RBP20.44■□□□□ 0.86
SSH3-211ENST00000534112 TBX2Q13207 712 aaPredicted RBP20.44■□□□□ 0.86
SSH3-211ENST00000534112 AADACL2Q6P093 401 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 SHISA6Q6ZSJ9 500 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 C2orf73Q8N5S3 287 aaPredicted RBP20.44■□□□□ 0.86
SSH3-211ENST00000534112 FAM71DQ8N9W8 422 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 LMNTD1Q8N9Z9 388 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 MENTQ9BUN1 341 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 SOX17Q9H6I2 414 aaPredicted RBP20.44■□□□□ 0.86
SSH3-211ENST00000534112 EPS8L2Q9H6S3 715 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 CUTCQ9NTM9 273 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 CTSFQ9UBX1 484 aa20.44■□□□□ 0.86
SSH3-211ENST00000534112 NXT1Q9UKK6 140 aaKnown RBP20.44■□□□□ 0.86
SSH3-211ENST00000534112 CROCCQ5TZA2 2017 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 ARHGAP10A1A4S6 786 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 CD9P21926 228 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 ELAVL4P26378 380 aaKnown RBP20.43■□□□□ 0.86
SSH3-211ENST00000534112 RWDD2BP57060 319 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 Q0VFX4 171 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 GRM7Q14831 915 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 TUBB8Q3ZCM7 444 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 YOD1Q5VVQ6 348 aaPredicted RBP20.43■□□□□ 0.86
SSH3-211ENST00000534112 SP5Q6BEB4 398 aaPredicted RBP20.43■□□□□ 0.86
SSH3-211ENST00000534112 FIGLAQ6QHK4 219 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 OR11G2Q8NGC1 345 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 SLC22A18Q96BI1 424 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 THOC3Q96J01 351 aaKnown RBP20.43■□□□□ 0.86
SSH3-211ENST00000534112 SEMA3GQ9NS98 782 aa20.43■□□□□ 0.86
SSH3-211ENST00000534112 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.43■□□□□ 0.86
SSH3-211ENST00000534112 S1PR4O95977 384 aa20.42■□□□□ 0.86
SSH3-211ENST00000534112 STSP08842 583 aa20.42■□□□□ 0.86
SSH3-211ENST00000534112 CCR7P32248 378 aa20.42■□□□□ 0.86
SSH3-211ENST00000534112 CETN2P41208 172 aa20.42■□□□□ 0.86
SSH3-211ENST00000534112 OR1D4P47884 311 aa20.42■□□□□ 0.86
SSH3-211ENST00000534112 SPA17Q15506 151 aa20.42■□□□□ 0.86
SSH3-211ENST00000534112 RBBP7Q16576 425 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms