RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SP140Q13342 867 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 USP10Q14694 798 aaKnown RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 KIR2DS3Q14952 304 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ZKSCAN8Q15776 578 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 CYP2A13Q16696 494 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ANKS6Q68DC2 871 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 SPESP1Q6UW49 350 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 TRIM73Q86UV7 250 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 FAM129CQ86XR2 697 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 KMT5CQ86Y97 462 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 CARFQ8N187 725 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 NKAPQ8N5F7 415 aaKnown RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ANKRD49Q8WVL7 239 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 SLC44A1Q8WWI5 657 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 TSPAN17Q96FV3 270 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 SLC12A9Q9BXP2 914 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 EPB41L4BQ9H329 900 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 GPAMQ9HCL2 828 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 C1GALT1Q9NS00 363 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 IKZF3Q9UKT9 509 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 PDE10AQ9Y233 779 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 V9GYY5 206 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ASPMQ8IZT6 3477 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 APC2O95996 2303 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 A0A1W2PPV9 198 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 SLC9B1P1A6NJY1 282 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 ISM1B1AKI9 464 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PRICKLE3O43900 615 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 ZBTB11O95625 1053 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 SLC16A8O95907 504 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PVRP15151 417 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 ST6GAL1P15907 406 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 STMN1P16949 149 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 MAP4P27816 1152 aaKnown RBP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 MAPK10P53779 464 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 ERVPABLB-1P60509 514 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 VSNL1P62760 191 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 SH3BP2P78314 561 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 BMPR2Q13873 1038 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 FASTKQ14296 549 aaKnown RBP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 ARHGAP19Q14CB8 494 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 UAP1Q16222 522 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PHKG1Q16816 387 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 SLC5A12Q1EHB4 618 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 TBC1D25Q3MII6 688 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 CLEC14AQ86T13 490 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 TAX1BP1Q86VP1 789 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 D2HGDHQ8N465 521 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 RAB42Q8N4Z0 105 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 KDF1Q8NAX2 398 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 MCOLN3Q8TDD5 553 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSBP3-214ENST00000533209 ANKRD7Q92527 254 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 USP7Q93009 1102 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PMEPA1Q969W9 287 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 CNTNAP3BQ96NU0 1288 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 TRAPPC9Q96Q05 1148 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 TAAR9Q96RI9 348 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PAFAH2Q99487 392 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PARVBQ9HBI1 364 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 SYTL2Q9HCH5 934 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 FBXO8Q9NRD0 319 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 SLC39A1Q9NY26 324 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 LNPEPQ9UIQ6 1025 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 BTRCQ9Y297 605 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 PCDHGA7Q9Y5G6 932 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 DMXL2Q8TDJ6 3036 aa11.58□□□□□ -0.56
SSBP3-214ENST00000533209 A0A0J9YY10 115 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 TMEM8BA6NDV4 472 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 C9orf172C9J069 976 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 CDC7O00311 574 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 NVLO15381 856 aaKnown RBP11.57□□□□□ -0.56
SSBP3-214ENST00000533209 PRAMEF10O60809 474 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 SYF2O95926 243 aaKnown RBP11.57□□□□□ -0.56
SSBP3-214ENST00000533209 FOLR1P15328 257 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 CYP2A7P20853 494 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 PSMB5P28074 263 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 IMPA1P29218 277 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
SSBP3-214ENST00000533209 SLC5A2P31639 672 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 GMPRP36959 345 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 HSD17B2P37059 387 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 CSRP3P50461 194 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 PNLIPRP1P54315 467 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 RAB10P61026 200 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 HSD11B2P80365 405 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 KCNAB1Q14722 419 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 PPP1R3AQ16821 1122 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 ERCC6LQ2NKX8 1250 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 MROH9Q5TGP6 573 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 CMC1Q7Z7K0 106 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 FAM20CQ8IXL6 584 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 LRRC56Q8IYG6 542 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-214ENST00000533209 ZNF480Q8WV37 535 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 DCAKDQ8WVC6 231 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 SMPDL3AQ92484 453 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 SLC22A18Q96BI1 424 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 ZNF578Q96N58 590 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms