RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 OR11G2Q8NGC1 345 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 COG1Q8WTW3 980 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
COPB1-209ENST00000533096 RELTQ969Z4 430 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 C8orf44Q96CB5 159 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 LURAP1Q96LR2 239 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 TBL1YQ9BQ87 522 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.5□□□□□ -0.412e-11■■■■□ 22.6
COPB1-209ENST00000533096 CUTCQ9NTM9 273 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 PIH1D1Q9NWS0 290 aaKnown RBP12.5□□□□□ -0.41
COPB1-209ENST00000533096 SUCOQ9UBS9 1254 aaKnown RBP12.5□□□□□ -0.41
COPB1-209ENST00000533096 CTSFQ9UBX1 484 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 ALG6Q9Y672 507 aa12.5□□□□□ -0.41
COPB1-209ENST00000533096 hCG_1818297A0A087WSY0 165 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 DYTNA2CJ06 578 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 BHMG1C9JSJ3 638 aaPredicted RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 LIN7AO14910 233 aaPredicted RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 KCNN4O15554 427 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 ALBP02768 609 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 EIF2S1P05198 315 aaKnown RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 CTNNA2P26232 953 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 ACADLP28330 430 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 ZNF140P52738 457 aaPredicted RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 MSLNQ13421 630 aaPredicted RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 GRM7Q14831 915 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 KIR2DS3Q14952 304 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 TAZQ16635 292 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 DBN1Q16643 649 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 FCRL6Q6DN72 434 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 DENND5AQ6IQ26 1287 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 ARHGEF18Q6ZSZ5 1173 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 COX15Q7KZN9 410 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 GDF7Q7Z4P5 450 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 PIANPQ8IYJ0 282 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 SIRT6Q8N6T7 355 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 DENND1AQ8TEH3 1009 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 NACC2Q96BF6 587 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 CDKN2AIPNLQ96HQ2 116 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 VPS50Q96JG6 964 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 IL17FQ96PD4 163 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 TAAR6Q96RI8 345 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 SPSB2Q99619 263 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 CRB3Q9BUF7 120 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 NHEJ1Q9H9Q4 299 aaPredicted RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
COPB1-209ENST00000533096 SEMA3GQ9NS98 782 aa12.49□□□□□ -0.41
COPB1-209ENST00000533096 IGLV3-16A0A075B6K0 115 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 PCDH17O14917 1159 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 DSCR3O14972 297 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 KDM1AO60341 852 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 WFS1O76024 890 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 STK10O94804 968 aaKnown RBP12.48□□□□□ -0.41
COPB1-209ENST00000533096 AP2A1O95782 977 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 MARCKSL1P49006 195 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
COPB1-209ENST00000533096 EIF3EP60228 445 aaKnown RBP12.48□□□□□ -0.41
COPB1-209ENST00000533096 OCA2Q04671 838 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 CACNG1Q06432 222 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 FAAH2Q6GMR7 532 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 FIGLAQ6QHK4 219 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 TAB3Q8N5C8 712 aaPredicted RBP12.48□□□□□ -0.41
COPB1-209ENST00000533096 AMER2Q8N7J2 671 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
COPB1-209ENST00000533096 OR5K2Q8NHB8 316 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 FKBP10Q96AY3 582 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 MIEF2Q96C03 454 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 CCDC120Q96HB5 630 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 SELENOSQ9BQE4 189 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 CHRNA10Q9GZZ6 450 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 WDR54Q9H977 334 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 SEC14L3Q9UDX4 400 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 ZC3H7BQ9UGR2 993 aaKnown RBP12.48□□□□□ -0.41
COPB1-209ENST00000533096 CROCCQ5TZA2 2017 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 DOPEY1Q5JWR5 2465 aa12.48□□□□□ -0.41
COPB1-209ENST00000533096 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 LRBAP50851 2863 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 HYKKA2RU49 373 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 OR51F1A6NGY5 319 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 MAP2K7O14733 419 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 AP2A2O94973 939 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 FTH1P02794 183 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 ACPPP15309 386 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 CD9P21926 228 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 NSG1P42857 185 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 KLC1Q07866 573 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 HSPA14Q0VDF9 509 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 POU6F1Q14863 301 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 ZNF630Q2M218 657 aaPredicted RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 FAM214AQ32MH5 1076 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 ZC3H12BQ5HYM0 836 aaKnown RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 RPUSD3Q6P087 351 aaKnown RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 LAPTM4BQ86VI4 370 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 STT3BQ8TCJ2 826 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms