RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 KLHL38Q2WGJ6 581 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 CCSMST1Q4G0I0 132 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 STEAP4Q687X5 459 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 TMEM126BQ8IUX1 230 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 CNTN4Q8IWV2 1026 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 C2orf73Q8N5S3 287 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-210ENST00000532935 LMNTD1Q8N9Z9 388 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 BBOF1Q8ND07 529 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 GIMAP7Q8NHV1 300 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 MAGEC3Q8TD91 643 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 SLC45A3Q96JT2 553 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 ERP44Q9BS26 406 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 AARSD1Q9BTE6 412 aaKnown RBP14.84□□□□□ -0.03
CPSF1-210ENST00000532935 RAB11FIP5Q9BXF6 653 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 SLC12A9Q9BXP2 914 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 FER1L5A0AVI2 2057 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 HEATR5BQ9P2D3 2071 aa14.83□□□□□ -0.03
CPSF1-210ENST00000532935 KRT87PA6NCN2 255 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 ZNF891A8MT65 544 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-210ENST00000532935 TMEM150CB9EJG8 249 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CPNE3O75131 537 aaKnown RBP14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CCNYL3P0C7X3 344 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CARSP49589 748 aaKnown RBP14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CYP4F2P78329 520 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CUL1Q13616 776 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 ZIC1Q15915 447 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 PCSK4Q6UW60 755 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CDHR3Q6ZTQ4 885 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 KIAA0408Q6ZU52 694 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 NEK10Q6ZWH5 1172 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 TAX1BP1Q86VP1 789 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 ANKMY2Q8IV38 441 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 RAB42Q8N4Z0 105 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 LSM14AQ8ND56 463 aaKnown RBP14.83□□□□□ -0.04
CPSF1-210ENST00000532935 OR1L3Q8NH93 324 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 KIF18AQ8NI77 898 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 INPP5DQ92835 1189 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 SLC22A18Q96BI1 424 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 TCTN2Q96GX1 697 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 C16orf45Q96MC5 204 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-210ENST00000532935 GPR21Q99679 349 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CHRNA10Q9GZZ6 450 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 FAM60AQ9NP50 221 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 PPANQ9NQ55 473 aaKnown RBP14.83□□□□□ -0.04
CPSF1-210ENST00000532935 IL17BQ9UHF5 180 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 CROTQ9UKG9 612 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 PADI1Q9ULC6 663 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 DHRS7Q9Y394 339 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 BOD1L1Q8NFC6 3051 aa14.83□□□□□ -0.04
CPSF1-210ENST00000532935 ARHGEF33A8MVX0 844 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 E7ESA3 106 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 PSIP1O75475 530 aaKnown RBP14.82□□□□□ -0.04
CPSF1-210ENST00000532935 AHSGP02765 367 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 F8A1P23610 371 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 GABRB3P28472 473 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 DLSTP36957 453 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 PDIA2Q13087 525 aaKnown RBP14.82□□□□□ -0.04
CPSF1-210ENST00000532935 CALCOCO2Q13137 446 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 TAF1BQ53T94 588 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-210ENST00000532935 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.82□□□□□ -0.04
CPSF1-210ENST00000532935 TEDDM1Q5T9Z0 273 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 PRAMEF17Q5VTA0 474 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 TRMT10BQ6PF06 316 aaKnown RBP14.82□□□□□ -0.04
CPSF1-210ENST00000532935 ZNF572Q7Z3I7 529 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-210ENST00000532935 SPNS2Q8IVW8 549 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 FAM20CQ8IXL6 584 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 CD200R1Q8TD46 325 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 DENND1AQ8TEH3 1009 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 WBP1Q96G27 269 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 NDNQ99608 321 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 DPH5Q9H2P9 285 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 LHX9Q9NQ69 397 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 FAM114A2Q9NRY5 505 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 SPATA7Q9P0W8 599 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 WHRNQ9P202 907 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 SLC17A6Q9P2U8 582 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 SERTAD3Q9UJW9 196 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 PCDHB3Q9Y5E6 796 aa14.82□□□□□ -0.04
CPSF1-210ENST00000532935 TERTO14746 1132 aaKnown RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 PRICKLE3O43900 615 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 VPS26AO75436 327 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CATP04040 527 aaKnown RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 ITGB2P05107 769 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 MPC1LP0DKB6 136 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CBSLP0DN79 551 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 ENO3P13929 434 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CYP2A7P20853 494 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 MAGP20916 626 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CBSP35520 551 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 ITGA1P56199 1179 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CBLBQ13191 982 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 FRG1Q14331 258 aaKnown RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 FASTKD3Q14CZ7 662 aaKnown RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 DUPD1Q68J44 220 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 UGT3A1Q6NUS8 523 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 GALNT7Q86SF2 657 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CPNE9Q8IYJ1 553 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 SLC38A9Q8NBW4 561 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 FBXO36Q8NEA4 188 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 OR9A1PQ8NGU1 263 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms