RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MAGP20916 626 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 COMTP21964 271 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 CDKN2BP42772 138 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 GABRA4P48169 554 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 CASP6P55212 293 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 OCA2Q04671 838 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 RBPJQ06330 500 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 Q0VFX4 171 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 RPA4Q13156 261 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 MFAP5Q13361 173 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 SLC18A3Q16572 532 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 SLC5A12Q1EHB4 618 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 FAAH2Q6GMR7 532 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 ITPRIPL1Q6GPH6 555 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 ARHGEF18Q6ZSZ5 1173 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 TMTC1Q8IUR5 882 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 KBTBD2Q8IY47 623 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 TBC1D21Q8IYX1 336 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 OR11G2Q8NGC1 345 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 SUN3Q8TAQ9 357 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 MIEF2Q96C03 454 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 CCDC120Q96HB5 630 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 SLX1AQ9BQ83 275 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 FERMT1Q9BQL6 677 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 MESP1Q9BRJ9 268 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 SEMA3GQ9NS98 782 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 ZNHIT6Q9NWK9 470 aaKnown RBP8.86□□□□□ -0.99
NEDD8-206ENST00000531430 OR6C2Q9NZP2 312 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 CTSFQ9UBX1 484 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 AAR2Q9Y312 384 aaKnown RBP8.86□□□□□ -0.99
NEDD8-206ENST00000531430 KLF2Q9Y5W3 355 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-206ENST00000531430 TACC2O95359 2948 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 PCNX1Q96RV3 2341 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 NSG1A0A0A6YYJ2 146 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 TRAV17A0A0B4J275 112 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 FAM227AF5H4B4 570 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 PCDH17O14917 1159 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 DSCR3O14972 297 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ZRANB2O95218 330 aaKnown RBP eCLIP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 RASAL1O95294 804 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 TPBGLP0DKB5 382 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ACPPP15309 386 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 CXCR2P25025 360 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 CTNNA2P26232 953 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ACRV1P26436 265 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 PSMB4P28070 264 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 PTGER4P35408 488 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 NSG1P42857 185 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 SLC1A1P43005 524 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 CARSP49589 748 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 VSX2P58304 361 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 GRM7Q14831 915 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 KIR2DS3Q14952 304 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ZNF630Q2M218 657 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 FAM214AQ32MH5 1076 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 GPR33Q49SQ1 333 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ZC3H12BQ5HYM0 836 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 WASHC2DQ5SRD0 308 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 LRRC38Q5VT99 294 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 RPUSD3Q6P087 351 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 DARS2Q6PI48 645 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 FIGLAQ6QHK4 219 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 RANBP10Q6VN20 620 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 VSIG1Q86XK7 387 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ZNF808Q8N4W9 903 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 DTWD1Q8N5C7 304 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 BRIX1Q8TDN6 353 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 NR4A3Q92570 626 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 NACC2Q96BF6 587 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 LRRC45Q96CN5 670 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 DNAJC1Q96KC8 554 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 CCDC42Q96M95 316 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 IL17FQ96PD4 163 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 TAAR6Q96RI8 345 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 SPSB2Q99619 263 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 SELENOSQ9BQE4 189 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 MRM3Q9HC36 420 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ZNF304Q9HCX3 659 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 SPTLC3Q9NUV7 552 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 INTS7Q9NVH2 962 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 IFNKQ9P0W0 207 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
NEDD8-206ENST00000531430 C3orf18Q9UK00 162 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 SLC39A10Q9ULF5 831 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.85□□□□□ -0.993e-9■■□□□ 11.5
NEDD8-206ENST00000531430 PRSS21Q9Y6M0 314 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 ADGRG4Q8IZF6 3080 aa8.85□□□□□ -0.99
NEDD8-206ENST00000531430 HIVEP1P15822 2718 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 HYKKA2RU49 373 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 AGAP14A8MT82 685 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 A8MUI8 341 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 HACD1B0YJ81 288 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 GOLGA6L19H0YKK7 550 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 FFAR3O14843 346 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 LIN7AO14910 233 aaPredicted RBP8.84□□□□□ -0.99
NEDD8-206ENST00000531430 GPR42O15529 346 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 KCNN4O15554 427 aa8.84□□□□□ -0.99
NEDD8-206ENST00000531430 STK10O94804 968 aaKnown RBP8.84□□□□□ -0.99
NEDD8-206ENST00000531430 AP2A1O95782 977 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms