RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 DNAJC22Q8N4W6 341 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 TTC29Q8NA56 475 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 OR6P1Q8NGX9 317 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 FLVCR1-AS1Q8TAF5 88 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 SKA2Q8WVK7 121 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 HDAC10Q969S8 669 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 FKBP10Q96AY3 582 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 IL17FQ96PD4 163 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 WDR77Q9BQA1 342 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 CHRNA10Q9GZZ6 450 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 AGPAT4Q9NRZ5 378 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 INTS7Q9NVH2 962 aaKnown RBP15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 SLC39A10Q9ULF5 831 aa15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 R3HDM2Q9Y2K5 976 aaKnown RBP15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 EPN1Q9Y6I3 576 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-204ENST00000530996 MROH6A6NGR9 719 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 AGPSO00116 658 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 CLDN1O95832 211 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 LDLRP01130 860 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 APOA4P06727 396 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 TPBGLP0DKB5 382 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 PIM1P11309 404 aaPredicted RBP15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 ARSFP54793 590 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 RBBP7Q16576 425 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 HIF1AQ16665 826 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 MRPL14Q6P1L8 145 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 SHISA6Q6ZSJ9 500 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 CUZD1Q86UP6 607 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 MCATQ8IVS2 390 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 METTL27Q8N6F8 245 aaPredicted RBP15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 LRRC57Q8N9N7 239 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 LMNTD1Q8N9Z9 388 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 DENND1AQ8TEH3 1009 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 UBE2Q2Q8WVN8 375 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 ATG4AQ8WYN0 398 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 INPP5DQ92835 1189 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 SLC22A18Q96BI1 424 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 PANX2Q96RD6 677 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 SOX17Q9H6I2 414 aaPredicted RBP15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 SLC6A20Q9NP91 592 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 SLC2A6Q9UGQ3 507 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 PCDHGA10Q9Y5H3 936 aa15.2■□□□□ 0.02
CHMP4A-204ENST00000530996 SHANK1Q9Y566 2161 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 BTNL10A8MVZ5 291 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 MIF4GDA9UHW6 222 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 CBX6O95503 412 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 S1PR4O95977 384 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 IFNB1P01574 187 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 UQCRHP07919 91 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 MMP11P24347 488 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 PPARGP37231 505 aaPredicted RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 DCTP40126 519 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 FASTKD1Q53R41 847 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 AARS2Q5JTZ9 985 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 TSTD2Q5T7W7 516 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 PRAMEF13Q5VWM6 474 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 IGFL3Q6UXB1 125 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 TMEM151BQ8IW70 566 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 SLC22A15Q8IZD6 547 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 SYCE1Q8N0S2 351 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 OTUD6BQ8N6M0 293 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 LINC01555Q8NAE3 123 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 OR13J1Q8NGT2 312 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 LKAAEAR1Q8TD35 194 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 SELENOSQ9BQE4 189 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 LACRTQ9GZZ8 138 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 EPS8L2Q9H6S3 715 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 MRM3Q9HC36 420 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 ZBTB20Q9HC78 741 aaPredicted RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 CUTCQ9NTM9 273 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 CTSFQ9UBX1 484 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 ANAPC5Q9UJX4 755 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 NOVA2Q9UNW9 492 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 FAM169AQ9Y6X4 670 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 MED13Q9UHV7 2174 aa15.19■□□□□ 0.02
CHMP4A-204ENST00000530996 MCM3P25205 808 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 CCR7P32248 378 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 GRIA3P42263 894 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 GRM7Q14831 915 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 SF1Q15637 639 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 TUBB8Q3ZCM7 444 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 ZC3H12BQ5HYM0 836 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 SEL1L2Q5TEA6 688 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 AGAP7PQ5VUJ5 663 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 TTC23LQ6PF05 361 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 VRK3Q8IV63 474 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 PARP9Q8IXQ6 854 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 RAB42Q8N4Z0 105 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 PPHLN1Q8NEY8 458 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 OR4L1Q8NH43 312 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 PPP4R1Q8TF05 950 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 ASZ1Q8WWH4 475 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 VPS50Q96JG6 964 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 AGAP4Q96P64 663 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 RAB11FIP5Q9BXF6 653 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 SLC22A11Q9NSA0 550 aa15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 TSR3Q9UJK0 312 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 NXT1Q9UKK6 140 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 REXO2Q9Y3B8 237 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-204ENST00000530996 CSAG2Q9Y5P2 127 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms