RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CASP9P55211 416 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 CLDN15P56746 228 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 EVCP57679 992 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 TRAF3Q13114 568 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 CA9Q16790 459 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 ELFN2Q5R3F8 820 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 NDUFAF5Q5TEU4 345 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 PRAMEF8Q5VWM4 474 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 TECPR1Q7Z6L1 1165 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 PIM3Q86V86 326 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 FJX1Q86VR8 437 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 AQP12AQ8IXF9 295 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 ODF3L1Q8IXM7 274 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 RYBPQ8N488 228 aaPredicted RBP6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 FAM216AQ8WUB2 273 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 CCDC107Q8WV48 283 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 MYADMQ96S97 322 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 P2RY12Q9H244 342 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 GKN1Q9NS71 199 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 HIF1ANQ9NWT6 349 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 HPF1Q9NWY4 346 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 ZNF224Q9NZL3 707 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 C11orf21Q9P2W6 132 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 AGTPBP1Q9UPW5 1226 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 ITM2BQ9Y287 266 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 HBS1LQ9Y450 684 aaKnown RBP6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 TEX264Q9Y6I9 313 aa6.05□□□□□ -1.44
CAPRIN1-208ENST00000530008 ZNF804BA4D1E1 1349 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 TRAV24A0A0B4J272 114 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 C5orf51A6NDU8 294 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 ZNHIT1O43257 154 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 LDB3O75112 727 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 LINC00271P0C7V0 271 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 PSG1P11464 419 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 IL10P22301 178 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 HPDP32754 393 aaPredicted RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 GNL1P36915 607 aaPredicted RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 SERPINH1P50454 418 aaKnown RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 LUMP51884 338 aaPredicted RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 UCP2P55851 309 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 SLC20A2Q08357 652 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 DSC1Q08554 894 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 IFI44LQ53G44 452 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 OR7E24Q6IFN5 339 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 PRSS55Q6UWB4 352 aaPredicted RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 BTNL8Q6UX41 500 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 PLXDC2Q6UX71 529 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 GFRALQ6UXV0 394 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 ASB18Q6ZVZ8 466 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 HDDC3Q8N4P3 179 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 RASGEF1AQ8N9B8 481 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 NPEPL1Q8NDH3 523 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 RDM1Q8NG50 284 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 OR13J1Q8NGT2 312 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 LILRB1Q8NHL6 650 aaPredicted RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 FGFBP3Q8TAT2 258 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 TAF4BQ92750 862 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 P2RX5Q93086 422 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 THOC1Q96FV9 657 aaKnown RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 TMEM19Q96HH6 336 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 PANX3Q96QZ0 392 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 RUFY1Q96T51 708 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 PRRG4Q9BZD6 226 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 Q9H8V8 135 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 PDRG1Q9NUG6 133 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 HMG20BQ9P0W2 317 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 HOOK1Q9UJC3 728 aaKnown RBP6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 KCNS2Q9ULS6 477 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 WDR83OSQ9Y284 106 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 TMED3Q9Y3Q3 217 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 JRKLQ9Y4A0 524 aa6.04□□□□□ -1.44
CAPRIN1-208ENST00000530008 ARHGEF17Q96PE2 2063 aaPredicted RBP6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 RNF103-CHMP3A0A140T963 221 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 C5orf60A6NFR6 353 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 CASTOR2A6NHX0 329 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 RNF103O00237 685 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 RPS6KA5O75582 802 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 LIPFP07098 398 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 SBK2P0C263 348 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 IRF2P14316 349 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 DESP17661 470 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 CBLP22681 906 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 JAK1P23458 1154 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 IER3P46695 156 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 CX3CL1P78423 397 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 EEF1A2Q05639 463 aaKnown RBP6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 ILF2Q12905 390 aaKnown RBP6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 GTF2H2Q13888 395 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 UGT3A2Q3SY77 523 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 TOR1AIP1Q5JTV8 583 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 SUSD4Q5VX71 490 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 GTF2H2CQ6P1K8 395 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 RHBDF2Q6PJF5 856 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 GGNQ86UU5 652 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 EXOC3L1Q86VI1 746 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 AMIGO1Q86WK6 493 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
CAPRIN1-208ENST00000530008 ADHFE1Q8IWW8 467 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms